Sinorhizobium meliloti SM11: SM11_chr3404
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Entry
SM11_chr3404 CDS
T01885
Symbol
pyc
Name
(GenBank) Pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00020
Citrate cycle (TCA cycle)
smx00620
Pyruvate metabolism
smx01100
Metabolic pathways
smx01120
Microbial metabolism in diverse environments
smx01200
Carbon metabolism
smx01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SM11_chr3404 (pyc)
00620 Pyruvate metabolism
SM11_chr3404 (pyc)
Enzymes [BR:
smx01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
SM11_chr3404 (pyc)
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
ATP-grasp_5
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AEH80639
UniProt:
F7X1S5
LinkDB
All DBs
Position
complement(3416123..3419581)
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AA seq
1152 aa
AA seq
DB search
MSISKILVANRSEIAIRVFRAANELGLKTVAIWAEEDKLALHRFKADESYQVGRGPHLPR
DLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFAEACAANGITFIGPKPETMRQ
LGNKVAARNLAISIGVPVVPATEPLPDDPEEIKRLAEEIGYPVMLKASWGGGGRGMRAIR
DPKDLIREVTEAKREAKAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSIQ
RRNQKVVERAPAPYLNDAQRQELADYSLKIARATNYIGAGTVEYLMDSDTGKFYFIEVNP
RIQVEHTVTEVVTGIDIVKAQIHILDGFAIGAPESGVPRQEDIRLNGHALQCRITTEDPE
QNFIPDYGRITAYRGATGFGIRLDGGTAYSGAVITRYYDPLLEKVTAWAPNPGEAIQRMI
RALREFRIRGVATNLTFLEAIISHPKFHDNSYTTRFIDTTPELFQQVKRQDRATKLLTYL
ADVTVNGHPEVKGRPKPSDDIAAPVVPFTGGDVKPGTKQRLDQLGPKKFAEWVKAQPEVL
ITDTTMRDGHQSLLATRMRTYDIARIAGTYARALPNLFSLECWGGATFDVSMRFLTEDPW
ERLAMVREGAPNLLLQMLLRGANGVGYKNYPDNVVKYFVRQAAKGGIDVFRVFDCLNWVE
NMRVAMDAVAEEDRICEAAICYTGDILNSARPKYDLKYYTALAAELEKAGAHMIAVKDMA
GLLKPAAARVLFKALKEATGLPIHFHTHDTSGIAAATVLAAVESGVDVVDAAMDALSGNT
SQPCLGSIVEALSGSERDPGLDPEWIRRISFYWEAVRHQYAAFESDLKGPASEVYLHEMP
GGQFTNLKEQARSLGLETRWHEVAQAYADANRMFGDIVKVTPSSKVVGDMALMMVSQDLT
VADVENPGKDIAFPESVVSMLKGDLGQPPGGWPEALQKKALKGEEPYDARPGSLLEDADL
DAERKGIEEKLGREVTDFEFASYLMYPKVFTDYAVACETYGPVSVLPTPAYFYGMAPGEE
LFADIEKGKTLVILNQAQGEIDEKGMVKMFFEMNGQPRSIKVPDRNRGASAAVRRKAEAG
NAAHLGAPMPGVISTVAVASGQSVKAGDVLLSIEAMKMETALHAEKDGVISEVLVRAGDQ
IDAKDLLVVFGG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatttccaagatccttgttgccaaccgttccgaaatcgccatccgcgtcttccgc
gcggccaatgagctggggcttaaaacggtcgcgatatgggctgaggaggataagctggcg
ctgcaccgcttcaaggcggacgagagttatcaggtcggacgcgggccgcaccttccccgc
gacctcggaccgatcgagagctatctgtcgatcgacgaggtgatccgcgtcgccaagctc
tccggcgccgacgccatacatccgggctatgggctgctctccgaaagcccggaattcgcc
gaggcctgtgccgcaaacggcatcaccttcatcggccccaagccggagacgatgcgccag
ctcggcaacaaggtcgcggcccgcaacctcgcgatctcgatcggcgtgccggtcgtgccg
gcgaccgagcctctgccggacgacccggaagagatcaagcgactggccgaggagatcggc
tatccggtgatgctgaaggcctcctggggcggcggcggccgcggcatgcgggcgatccgc
gaccccaaggacctgatccgcgaggtgaccgaggccaagcgcgaggccaaggccgccttc
ggcaaggacgaggtctatctcgaaaagctcgtcgagcgcgcccgtcacgtcgaaagccag
atcctcggcgacacgcacggcaatgtcgtccatcttttcgagcgcgactgctcgatccag
cgtcgcaaccagaaggtcgtggagcgggcgccggcgccctatctcaatgatgcgcagcgc
caggaactcgcggattattcgctgaagatcgccagggcgaccaactatatcggcgcaggc
accgtcgagtatctgatggattccgataccggcaagttctacttcatcgaggtcaatccg
cgcatccaggtcgagcatacggtcaccgaggtcgtcaccggcatcgatatcgtcaaggcg
cagatccatattctcgacggcttcgccatcggtgcgccggaatcgggcgtgccgcgccag
gaggacatccgcctcaacggccatgcgctgcagtgccgcatcacgacggaagacccggag
cagaacttcattccggattatggccgcatcaccgcctatcgcggcgccaccggcttcggc
atccgcctcgacggcggcaccgcctattccggcgcggtgatcacccgttactacgatccg
ctgctcgagaaggtcaccgcctgggcgccgaacccgggcgaggcgatccagcggatgatt
cgtgcgctgcgagaattccgcatccgcggcgtggcgaccaacctcaccttcctcgaggct
atcatcagccacccgaagttccacgacaacagctatacgacgcgcttcatcgacacgacg
ccggaattgttccagcaggtcaagcgccaggaccgcgccaccaagcttctcacctatctc
gccgacgtcaccgtcaacggccatccggaagtcaagggccggccgaagccttccgacgat
atcgccgcgccggtcgtgccgttcaccggcggcgatgtgaagcccggcacgaagcagcgc
ctcgaccagctcggcccgaagaaattcgccgaatgggtgaaggcgcagccggaggtgctg
atcaccgacacgacgatgcgcgacggccaccaatcgcttctcgccacgcgcatgcgcacc
tacgacatcgcccgcatcgccggcacctatgcgcgggcgctgcccaacctcttttcgctc
gaatgctgggggggcgcgaccttcgacgtgtcgatgcgcttcctgaccgaagatccgtgg
gagcggctggcgatggtgcgcgagggtgcgccgaacctgctcctgcagatgcttctgcgc
ggcgccaacggcgtcggctacaagaactatccggataatgtcgtcaaatatttcgtccgc
caggccgcgaagggaggcatcgacgtcttccgcgtcttcgactgcctgaactgggtcgag
aacatgcgcgtggcgatggacgcggtggccgaggaggacaggatctgtgaggcggcgatc
tgctacaccggagacatcctcaattccgcccggccgaaatacgacctgaaatactacacg
gcgcttgcggccgagctggaaaaggccggcgcccacatgatcgccgtcaaggacatggcc
gggctcctgaagccggccgcggcgcgtgtgctcttcaaggcgctcaaggaagcgaccggc
ctgccgatccattttcacacgcacgacacttccggaattgcggcggcgaccgtgctcgcc
gcagtcgagtcgggcgtcgatgtcgtcgatgcggcgatggacgcgctctccggaaacacc
tctcagccctgcctcggctcgatcgtcgaagcgctgtccggctcggagcgcgacccgggt
ctcgatccggaatggatccgccgcatctccttctactgggaggcggtacgccatcaatat
gcggccttcgaaagcgacctcaaggggccggcttcggaagtctatctgcacgagatgccg
ggcggccagttcaccaacctgaaggaacaggcccgctcgctcggcctcgagacccgctgg
cacgaggtggcgcaggcctatgccgacgccaaccggatgttcggcgatatcgtcaaggtg
acgccgtcttccaaggtcgtcggcgacatggctctgatgatggtctcccaggatctgacg
gtcgccgatgtcgagaatccgggcaaggacatcgccttcccggaatcggtcgtctccatg
ctcaagggcgacctcggccaaccgccgggcggctggccggaggcgctgcagaagaaggcg
ctgaaaggcgaggagccctatgacgcgcgtccgggctcgctgctcgaagacgcggatctc
gacgccgagcgcaagggcatcgaggagaagctcggccgcgaagtgaccgatttcgagttc
gcctcctacctcatgtatccgaaggtcttcaccgattatgcggtggcctgcgagacctac
ggcccggtcagcgtgctgccgacgcccgcctatttctacgggatggcgccgggtgaggaa
ctcttcgccgacatcgagaagggcaagacgctcgtcatcctcaaccaggcgcagggggag
atcgacgagaagggcatggtcaagatgttcttcgaaatgaacgggcagccgcgttccatc
aaggtacccgaccgcaaccgcggcgcctcggctgccgtccgccgcaaggcggaagccggc
aacgccgcccatctcggcgcgccgatgccgggcgtgatctcgaccgttgcggtggcctcc
ggccaatcggtcaaggccggagacgtgctgctctccatcgaggcgatgaagatggagacg
gcgcttcacgccgagaaggacggggtgatttccgaggtgctcgtaagggccggcgatcag
atcgatgcgaaggatctgctggtggtgttcgggggttaa
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