KEGG   Sinorhizobium meliloti SM11: SM11_chr3470
Entry
SM11_chr3470      CDS       T01885                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
smx  Sinorhizobium meliloti SM11
Pathway
smx03030  DNA replication
smx03430  Mismatch repair
smx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SM11_chr3470 (dnaQ)
   03430 Mismatch repair
    SM11_chr3470 (dnaQ)
   03440 Homologous recombination
    SM11_chr3470 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smx03032]
    SM11_chr3470 (dnaQ)
   03400 DNA repair and recombination proteins [BR:smx03400]
    SM11_chr3470 (dnaQ)
Enzymes [BR:smx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SM11_chr3470 (dnaQ)
DNA replication proteins [BR:smx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SM11_chr3470 (dnaQ)
DNA repair and recombination proteins [BR:smx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SM11_chr3470 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AEH80705
UniProt: F7X2E7
LinkDB
Position
3509991..3510719
AA seq 242 aa
MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGERKVHPEALAVHGIT
DEFLKDKPPFADVAQEIVDFFGDARWVAHNATFDIGFINAEFERLGLPPIGSDRVIDTLA
LARRKHPMGPNSLDALCRRYGVDNSHRTRHGALLDSELLAEVYIEMIGGRQAALGLVVTE
AGDRPIEADDGPVVVVTRERPLRPRLTEAEIAAHAALVAKIGANAIWSKYSEADDVLRSE
AV
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcatctttgatacggaaacgaccggcctcgacaaccgcgaggaccgggtg
atcgagatcggcggtatcgagctcgagaaccagtttccgacggggcgcacgatccatatc
tatatcaatccgggggagcgcaaggttcacccggaagcgctggccgtccacggtatcacc
gacgagttcctgaaggacaagccgcccttcgccgatgtcgcccaggaaatcgtcgatttc
ttcggcgatgcccgttgggtcgcccacaacgccaccttcgacatcggcttcatcaatgcg
gagttcgagcggctcggcctgccgccgatcggcagcgaccgggttatcgacactctggct
cttgcccgccgcaagcacccgatggggccgaattcgctcgatgcgctctgccgtcgctac
ggtgtagacaactcccatcgaaccaggcacggagccctgctcgactccgagctgctggcc
gaggtctatatcgagatgatcggcgggcgccaggccgcgctcggtctcgtggtgacggag
gcaggtgaccggccgatcgaggctgacgacggaccggtcgtcgtggtcacaagggaaagg
cctctacggccacggctgacggaggccgagatcgccgcccatgcggcgctcgtcgcgaag
atcggcgcgaatgcgatctggtcgaagtacagcgaagccgatgacgttctcagatcggaa
gctgtctag

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