Sinorhizobium meliloti SM11: SM11_chr3499
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Entry
SM11_chr3499 CDS
T01885
Symbol
addB
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_chr3499 (addB)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM11_chr3499 (addB)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SM11_chr3499 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEH80734
UniProt:
F7X2H6
LinkDB
All DBs
Position
complement(3543298..3546477)
Genome browser
AA seq
1059 aa
AA seq
DB search
MPGHPNVFTIPAGLPFLRTVAERLCNGELTPGFRYDPAQPLALAGVTIFVPTRRSARVLR
SEFVDLLGGRSAILPMIRALGETDDDSGFFDAEVPAILDLAPPLSGTARLIELGRLILAW
RNRLPQVVLDIHAESPLIAPASPADAIWLARNLAELIDAIETEELDWDALDGLDGGEHAL
WWQLTLAFLKIARTYWPERLAELKHSSPARHRNAVLKAETQRIAAGKVSGPIIIAGSTGS
IPATAALIAAVKTLPNGTIVLPGLDGSMSDAEWRLIAGETSGSGTSARNPASRTHPQYGF
HRLLKRMGIELGDVPALASAADDLDYRSAVLSRALLPADATDVWMEARRSFDAERLLSAF
ADVALIEAANEREEATAIAIALRLALEADEESQAALITPDRGLARRVGTELARFGIEADD
SAGIPLSATPAGALARLLLEATLRPDDPVALVALLKHPLARFGRTADDARRAADVLELAA
LRGGTDAADVSALEAVLDKALDRQKTDRHPPPWRAGIGPDDIAMARALARRIASAVGPLS
SNLSADPQTGRHRSTVLPLSDWAERTGRALEAAAIDEQGNLGALWASEAGEILATLLRGI
IETDGQMEADGPQWCDILEALAASEAVKPRSMRHPRVFIFGALESRLQSVDLVVLGGMNE
GTWPGQTSNDPFLSRTMKAGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTV
ASRWLQRLQALGGERLTALLKANGADYLHWMRILDQGERQPLSERPEPKPPAELQPRKYS
FSEVTRLRRDPYAVYARRILRLEPIQPFNRDPGAAERGLLYHRIVDRFVKGGFDPAAREG
EEAMIRLTDEAFDEEKLPAHIDTIWRPRFQAVGRAFLEWERERRHGIVKSFTEVPAAMDL
GIGDIRLTGIADRLDRLADGTIDIIDYKTGSSPSPKEARALLDPQLALEAAALRAGAFRV
IGPAQPHSLRYVRLKPGSRFAVDTVNNEGARSKETKSTGQLADESLAELRKLLSALMSGR
FGFASRLIVQKQRDYGGEYDHLARVAEWATADGEDDDEE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggacatccgaacgtcttcacgattccagctggcctgccctttctgaggacggtc
gcggaaaggctctgcaatggcgagctgacccctggcttccgctacgatccggcgcagccg
ctggcactggccggtgttacgatcttcgtgccgacccggcgctccgcccgcgtgctgcgt
tcggaattcgtcgatctgctcggcggccgttcggcgatcctgccgatgatccgggcgctc
ggcgagaccgacgacgacagcggcttcttcgacgccgaggtgccggcgatcctcgacctc
gcgccgccgctttccggaacggcacggctcatcgaactcggccgcctcattctcgcctgg
cgaaaccgcctgccgcaggtggtcctcgacatccacgcggaaagcccgctgatcgctccg
gcaagccctgccgacgccatctggctcgcgcggaacctcgccgaactcatcgatgcgatc
gagaccgaggaactcgactgggatgccctcgacgggctcgacgggggcgaacatgcgctc
tggtggcaactgacgctcgccttcctaaagatcgcccgcacctattggccggagcggctg
gccgaactcaagcactcctcgcccgcacgccaccgcaatgcagtgctgaaggccgagacc
cagcgtatcgccgccggcaaagtgagcgggccgatcatcatcgccggttcgaccggttcg
atcccggcgacggccgcactgatcgccgcggtcaagacgctgccgaacggtacgatcgtg
ctccccggcctcgacggatcgatgagcgatgcggagtggcggctgatcgcgggagagacg
tccggctccggcacttctgcaaggaacccggcaagccgcacccacccgcaatatggattt
caccgtctgctcaagcgcatgggcatcgaactcggggacgtgcccgcccttgcgagcgct
gccgatgatctcgactatcgcagcgcggtcctttcgcgggcgctgttaccggccgacgcg
actgacgtctggatggaagcccgccggagcttcgatgcggaaagactcctctccgccttt
gcggatgtggcgctgatcgaagcggcgaacgaacgcgaagaggcaaccgccatcgcgatc
gcgcttcggctcgcgctcgaagccgacgaggagagccaggcggcgctcatcacccccgat
cgaggccttgcgcgtcgggtcggcaccgagcttgcccgcttcggtatagaggcggacgat
tccgccggcattccgctctcggcgacgccggcgggcgcacttgcccggctgctgctggag
gcaacgctcaggcccgacgacccggtcgccctggtcgcactcctcaagcatccgctggcg
cgcttcggccggacggcggacgatgcgcgccgagctgcggacgtgctggagctcgcggcc
ctgcgcggcggcaccgatgcggccgacgtttcggccttggaagcggtcctcgacaaggcg
ctcgacaggcagaagaccgaccggcacccgccgccctggagagcgggtatcggcccggac
gatatcgccatggcgcgcgcactcgcacgccggatagcctcggcggtcggccccctgtcc
agcaatctctctgccgacccgcaaaccggccgtcaccgctcgaccgtgctgcccctttcg
gattgggcggagcgtacggggcgcgctctggaggcggccgccatcgacgagcaaggcaat
ctcggcgccctctgggcttcggaagccggcgaaatattggcgacgctcctcaggggcatc
atcgaaaccgatggccagatggaggccgacgggccgcaatggtgcgacattctcgaggcg
cttgccgcaagtgaagccgttaagccgcggtcgatgcgccatccccgcgtcttcattttc
ggagcgctcgaatcgcgcctgcaaagcgtggacctcgtggtgctcggcggcatgaacgag
ggcacctggcccgggcagacgtcgaacgatccgttcctttcgcgaacgatgaaggcgggt
atcggtctggagccgccggagcggcgcatcggccagctcgcgcatgacttccagatggcc
tgcggcacccgccggctgatcctttcgcgctccatgcgtcagggatcggcgccgacggtg
gcttcccgatggctgcagcgccttcaggcgctcggcggcgagaggctgacggcgctgctc
aaggcaaatggcgccgactatctccactggatgcgcattctcgaccaaggcgagcgtcag
ccgttgtcggagcggccggaaccgaagcctcccgcggagctgcagccccgaaaatattcc
ttcagcgaagtgacgcggctgcgccgcgatccctatgccgtctacgcgaggcgcattctc
cggctggaaccgatccaaccgttcaaccgcgatccgggtgcggccgaacgcggcctgctc
tatcaccggatcgtcgatcgattcgtgaagggcggcttcgacccggcggcgcgcgagggc
gaggaagcgatgatccggctcaccgacgaggccttcgacgaggagaaactgcctgcgcat
atcgacaccatctggcggccacgcttccaggcggtcggaagggcgttcctcgaatgggaa
cgggagcgccggcacggcattgtgaaatcgttcaccgaggtaccggcggcgatggatctc
ggcatcggcgatatccggctgaccggcatcgccgaccggctggatcgcctggcggacgga
acgatcgacatcatcgactacaagaccggatcgagcccctcgcccaaagaggcacgggcg
cttctcgacccgcagctggcgctcgaggcggcggcgctcagggccggggcattccgtgtg
atcggtccggctcagccgcactcgctgcgctatgtccggctgaagccgggcagccggttt
gccgtcgacacggtcaacaacgagggcgcccgttcgaaggagacgaaatctaccggacag
ctggcggacgagtcgctcgccgagctccgcaagctgctttccgcgcttatgagcggcagg
ttcggcttcgcctcgcgcctgatcgttcagaaacaacgcgactacggcggggaatacgat
catctggcgcgcgtcgccgaatgggcgaccgcagatggcgaggacgacgatgaggagtga
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