Sinorhizobium meliloti SM11: SM11_chr3739
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Entry
SM11_chr3739 CDS
T01885
Symbol
rnd2
Name
(GenBank) probabable ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smx03016
]
SM11_chr3739 (rnd2)
Enzymes [BR:
smx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SM11_chr3739 (rnd2)
Transfer RNA biogenesis [BR:
smx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SM11_chr3739 (rnd2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEH80965
UniProt:
F7X4I9
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All DBs
Position
3806024..3806650
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AA seq
208 aa
AA seq
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MANTIRFHEGDISETDAARYTGAIAIDTETLGLVPRRDRLCVVQLSSGDGTADVIRISAG
QKQAPNLVSMLADPTRQKIFHFGRFDIAVLFHTFGVTASPVFCTKIASRLARTYTDRHGL
KDNLKELLDIDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDKLTARLLRDGRMEL
AEACFSFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacaataaggttccacgagggcgacatttccgagaccgacgccgcccgctat
acgggcgcgatcgcgatcgatacggaaacgctcggcctggtcccgcgtcgcgaccgcctt
tgcgtcgtgcagctctcgtccggcgacgggactgccgatgtgatccgcatctccgccggc
cagaagcaggcgccgaacctcgtctcgatgctcgccgatccgacgcgccagaagatcttc
catttcggccgcttcgacatcgccgtgctgttccataccttcggcgtcaccgcgtcgccg
gtcttctgcaccaagatcgcctcgcgcctcgcccgcacctatacggaccggcacggtctc
aaggacaatctcaaggaactgctcgacatcgacatttccaagcagcagcagtcttccgat
tgggccgccgacattctttcgccggcgcagctcgaatatgccgcctccgacgtgctccac
ctgcatgcgctgcgcgacaagctgacggcgcggctcctgcgcgatggccggatggaactc
gccgaggcctgcttctcgtttctccccacgcgtgccaagctcgatctgctcggctgggaa
gaggcggacatcttcgcgcatagctga
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