Sinorhizobium meliloti SM11: SM11_chr3774
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Entry
SM11_chr3774 CDS
T01885
Symbol
xseA
Name
(GenBank) putative exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SM11_chr3774 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_chr3774 (xseA)
Enzymes [BR:
smx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SM11_chr3774 (xseA)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SM11_chr3774 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AEH81000
UniProt:
F7X4M4
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All DBs
Position
3839330..3840910
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AA seq
526 aa
AA seq
DB search
MTSFFDSESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMAL
IEERKRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRIADRFPVHVIVWPV
RVQGDGACEEIVAAIEGFNALQPGGSIPRPDVLIVARGGGSLEDLWCFNDEAMVRAAAAS
AIPLISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLAARLKGAAARQ
MDNRRQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERNAAHLRP
ELLTARIVDRRQRVLDAVNRAERIVERKVQRGAQRISSADASLRVLPSRLIGQIHRASDR
VSSLGRRGDAAIAADLRRMKSALAAQDRVLQSLSYHSVLQRGFALVRDAAGEPVKQAAAV
HPGMALSLEFADGRIAAVAGEDGTAPQSPKKRPARSGEPTKQGSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttctttgattccgaatctccctccaacgtcgccgaatattcggtgtcggaa
ttgtccggctcgatcaagcgcacggtcgagcaggccttcgagcatgtccgggtgcggggc
gagatttccggctaccgcggcccgcattcctcgggacacgcttatttcgccctgaaggac
gatcgcgcccgcatcgatgcggtcgtctggaagaccaccttcgcgcggctgaagttccgg
ccggaggaggggatggaggtcatcgcgaccggcagggtcacgaccttccccggctcgtcc
aaatatcagatcgtcatcgactcgcttgagccggccggtgccggggcgctgatggcgctt
atcgaggaacgcaagcgcaagcttgcggcggagggccttttcgatgcgggccgcaagcgg
ccgctgcctttcatgccgagggtcgtcggcgtcgtgacctcgccgaccggagctgtgatc
cgcgacatcctgcaccgcattgccgaccgtttcccggtccatgtcatcgtctggccggtg
cgcgtgcagggcgacggcgcctgcgaggagatcgtggcggcgatcgagggtttcaacgcg
ctgcagccgggcggctccattccccggcccgacgtgctgatcgtcgcgcgcggcggcggc
agcctcgaggatctctggtgcttcaacgacgaggcgatggtgcgcgccgcggcggcttcc
gccatccctctgatctcggccgtcggtcacgagacggactggacgctgatcgaccatgcg
gccgaccagcgggcgccgacgccgaccggtgcggccgaaatggcggtgccggtgaaggcc
gatctcgaggcccagctcgccagtctcgcagcccggctcaagggcgccgcggcgcggcag
atggacaatcgccgccagacgctgcgctcgcttgcgcgggcgctaccctcgctcgaccaa
ttgctcgccttgcctcggcgtcgcttcgacgaggcggccgccggactcggccgcggcctg
cagatgaacaccgccaacaagcggcgaagcttcgaacgcaatgcggcccatctccggccg
gagctcctgacggcaaggatcgtcgatcgccgtcagcgcgtcttggatgccgtcaaccgg
gccgagcgcatcgtcgagcgtaaggttcaacgtggcgctcagcgcatttcgtctgccgat
gcctcgctccgcgttctgccgtcgcggctgatcggccagattcatcgcgcatcggatcgc
gtttccagcctgggcaggcgtggggatgcggcgatcgccgccgatctgcgcaggatgaaa
agcgcgcttgcagcacaggaccgcgtgctgcagtcgctctcctatcacagcgtcctgcag
cgcggcttcgcgctggtgcgcgatgccgcgggcgagccggttaaacaggcggctgccgtg
catcccgggatggcgctttcgctggaattcgccgatggccgcatcgcggcggtcgccggc
gaggacggcactgcgccgcagtcgccgaagaagcggcctgcacgctccggcgagccgacg
aagcagggcagcctcttctga
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