Sinorhizobium meliloti SM11: SM11_pC0046
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Entry
SM11_pC0046 CDS
T01885
Symbol
uvrD2
Name
(GenBank) UvrD2 DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx03420
Nucleotide excision repair
smx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SM11_pC0046 (uvrD2)
03430 Mismatch repair
SM11_pC0046 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smx03400
]
SM11_pC0046 (uvrD2)
Enzymes [BR:
smx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM11_pC0046 (uvrD2)
DNA repair and recombination proteins [BR:
smx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM11_pC0046 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
SM11_pC0046 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
HHH
HHH_5
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AEH81119
UniProt:
F7XAT5
LinkDB
All DBs
Position
pSmeSM11c:complement(47374..49443)
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AA seq
689 aa
AA seq
DB search
MATATHLEKLNERQRCAVEYGIGAEEGAQAGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD
PRRILLMTFSRRAAAEMSRRVERICAQVLGRSSGMMTDALSWAGTFHGIGARLLRIYAEQ
IGLNAEFTIHDREDSADLINLIRHELGFSKTESRFPTKGTCLAIYSRTVNAEMRLNEVLR
TWYPWVAGWEQQLQELFAGYVEAKQAQNVLDYDDLLLYWAQMVSDASLADDIGNRFDYVL
VDEYQDTNKLQSSVLLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPKQFAPAAEIV
TLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIVEQV
LANRESGMLLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF
AQNPRDRVAGFRLLQMLPGVGPQTAGKILDTIAADPEPLMALGEVPAPPRSGTDWMSLVE
LLQALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRADLVQLEQIAAGYPSRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLATGTSHE
LEEERRLLYVGMTRAKDQLTLMVPQRFFTGGQHAQGDRHVYASRTRFIPATLLQFFESAN
WSVASPNVSERSAKQIRIDVAARMRTMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgacccatctggagaaactgaacgagagacagcgctgcgcagtcgaatat
ggcatcggagcagaagaaggcgcccaagcaggcccgctgttgatcatcgcaggagcgggc
tccgggaagaccaacaccttggcccatcgcgttgctcacctgatcgtcaacggggccgac
ccccgccgcattctcctgatgaccttctcgcggagggccgcggctgagatgtcgcgccgc
gtcgagcgtatctgcgcacaggtgctcggccgcagttccggaatgatgacggacgccctt
tcatgggcggggacctttcacggtatcggcgcacggttgctgagaatctatgccgaacag
atcggactgaatgcggagttcaccattcacgaccgcgaggatagcgccgacttgatcaac
ctgatacgccacgaactcggcttctcgaagacggaaagtcggtttccgaccaagggcacc
tgtctggcgatctattcgcggacagtgaacgcggaaatgcgactgaatgaagtgctccgc
acttggtacccgtgggtagctggctgggaacaacagttgcaggagctgtttgccggctac
gtcgaggccaagcaggcgcagaacgtcctcgactacgatgacctgcttctctattgggcg
cagatggtcagcgatgcctccctcgccgacgatatcggcaaccggttcgactatgtcctc
gtcgatgaatatcaggataccaacaagctccaatcttcggtgctgctggccctgaagccc
gacgggcgcggcttgacggtcgttggcgacgacgcgcagtcgatctactcgttccgcgcg
gcgacggtccgcaacattctcgactttccgaagcaattcgcgccggcggccgagatcgtc
acgctcgaccgcaactaccgttcgacccagccgatcctcgcagccgccaacggggttatc
gacctggcgcgggaacgcttcaccaagaacctctggacggaccgcgagtcggctgaacgt
cccaagctgctgacggtgaaggacgaggccgatcaggcgaactgcatcgtcgagcaggtg
cttgccaatcgtgaatccgggatgctcctgaaacagcaggccgtcctgttccgcacctcg
agccacagcggcccccttgaggtggaactgacccgccgcaacatccccttcgtaaagttc
ggaggcctgaagttcctcgacagcgcccacgtgaaggacatgctggccgtgctgcgcttt
gcacagaacccacgtgaccgcgtcgcgggcttccggctcctgcagatgctgccgggagtc
ggcccgcagaccgcgggcaagatcctggacacgattgcggccgatcccgagccgttgatg
gcgcttggcgaagtcccagctccgccgaggagcggcacggactggatgtccttggtcgag
ttgctgcaggccctgcgcaaacccggttccgcatggccgacggaaatagagatggcacgg
atgtggtacgagccgcatctcgagcgaatacacgaggatgccgaaacgcgccgggccgac
ctcgtgcaactcgagcagatcgccgcaggctatccgagccgcgagcgcttcctcacggag
ttgacgctcgatccgccggacgcgacgagcgaccaggctggcgtgcctttactcgacgaa
gactatcttatcctgtcgaccatccattcggccaaggggcaggaatggcgctccgtcttc
atgctcaacgtggtcgacggttgcattccgtcagacctggcgacaggcaccagccacgaa
ctggaggaggagcggcgacttctctatgtcggtatgacacgcgccaaggaccaactgacg
ctgatggtgccgcaacgcttcttcaccggcggtcagcacgcgcagggtgaccgccatgtc
tacgcaagccgcacacgcttcatccccgcgacattgcttcagttcttcgagagtgcaaac
tggtcagtcgccagccccaatgtttccgagcgtagcgcaaagcagatccgcatcgatgtc
gcagcccggatgcgcaccatgtggcggtag
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