Sinorhizobium meliloti SM11: SM11_pC1131
Help
Entry
SM11_pC1131 CDS
T01885
Symbol
nifA
Name
(GenBank) NifA transcriptional activator
KO
K02584
Nif-specific regulatory protein
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SM11_pC1131 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smx03000
]
SM11_pC1131 (nifA)
Transcription factors [BR:
smx03000
]
Prokaryotic type
Helix-turn-helix
Other families
SM11_pC1131 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
AAA
AAA_3
nSTAND3
AAA_7
AAA_22
TsaE
TIP49
Motif
Other DBs
NCBI-ProteinID:
AEH82204
UniProt:
F7XF79
LinkDB
All DBs
Position
pSmeSM11c:1033333..1034958
Genome browser
AA seq
541 aa
AA seq
DB search
MRKQDKRSAEIYSISKALMAPTRLETTLNNFVNTLSLILRMRRGGLEIPASEGEKKITAA
TRNSGSPSAADYTVPKAAIDQVMTAGRLVVPDVCNSELFKDEIKWRGIGPTAFIAAAVEV
DHETGGMLWFECAEESDSDYEEEVHFLSMAANLAGRAIRLHRTMSRRERTFAEEQQEQQN
SRDEQSQSSARQRLLKNDGIIGESTALMTAVDIAKVMAETNSIVLLRGETGTGKECFAKL
IHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFESANGGTLLLDE
IGEIPPAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQNGEFREDLYYR
ISGVPLILPPLRHRDGDIPLLARAFLQRFNEENGRDLHFAPSALDHLSKCKFPGNVRELE
NCVRRTATLARSKTITSSDFACQTDQCFSSRLWKGVHCSHGHIEIDAPAGTTPLLGAPAN
DVPPKEPGSAGVASNLIERDRLISALEEAGWNQAKAARILEKTPRQVGYALRRHGVDVRK
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacaggacaagcgctccgccgaaatttacagcatatcaaaggctctgatggcc
cccactcgtcttgagaccacgcttaacaatttcgtgaataccctctctttgattctgcgc
atgcgccgcggcggactcgagattccggcgtcggaaggagagaaaaagataacagcggct
acccgcaacagcgggtctccttctgccgctgattatactgtaccaaaggccgcaatagac
caagtcatgactgccgggcggctggtcgtaccagacgtttgcaactctgagctgttcaag
gatgagataaaatggcgcggaattggtccgactgccttcatcgctgcggcggtggaagtc
gatcacgaaacgggcggaatgctgtggttcgagtgcgccgaagagtccgattctgattat
gaggaggaggtacactttctttctatggccgccaatcttgcggggagggccattcggctt
catcgcacaatgagcaggcgtgagcggacatttgccgaagagcagcaagaacaacagaat
tcacgtgatgagcagagccagagttccgcccgccagcggctgctcaagaatgacgggatc
atcggggaaagtaccgccctcatgacggcggtagatatcgccaaagtcatggcagagacc
aattcaatcgttctccttaggggagaaacaggaactggcaaggaatgctttgcgaagcta
atccaccagcattcgactcggcaaaaaaagcccttcatcaagttcaattgccccgcgctg
tctgagagccttctcgaatcagagctgtttggacatgagaaaggtgcgttcaccggggct
attgctcaacgagtaggccgtttcgaatcggcgaatggcggaacgttgctgctcgatgaa
atcggcgagattcccccggcgttccaagcaaaactgctacgcgtaatacaggaaggtgaa
tttgagcgagtcggcggcacaaagacgctgaaagtcgacgtccggctcatattcgccaca
aataaggatctcgaaatggcggtccagaatggggagttcagggaagacctttactaccgc
atcagcggggtgcccctcattttgccgccccttaggcaccgcgacggtgacattccgctc
cttgcaagagcattccttcagcggttcaacgaagagaacggtcgtgatctccatttcgcg
ccgtctgcgcttgaccacttgtcgaagtgcaagttccctggaaacgttcgcgagctggaa
aactgtgtgcggaggactgcaactctcgccaggtcaaagacgatcacttcgtcagatttc
gcctgccaaacggaccagtgtttttcttctcgcctctggaaaggcgttcactgttcgcat
ggccacattgagatcgatgcgcccgcgggtacaacaccgttgctcggagcgccagccaat
gacgttccgccgaaagagcccggatccgcaggagtggcatccaatctgatcgagcgcgac
cggttgatcagtgcgctggaggaggccggttggaatcaggcaaaggcagctcgcatcctc
gaaaaaacgccccggcaggtcgggtatgctctacgtcggcatggtgtggacgtgagaaag
ctctaa
DBGET
integrated database retrieval system
