Sinorhizobium meliloti SM11: SM11_pC1563
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Entry
SM11_pC1563 CDS
T01885
Name
(GenBank) Transcription regulator TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smx03000
]
SM11_pC1563
Transcription factors [BR:
smx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SM11_pC1563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
HTH_IclR
Sigma70_r4_2
TetR_C_10
Motif
Other DBs
NCBI-ProteinID:
AEH82636
UniProt:
F7XCD0
LinkDB
All DBs
Position
pSmeSM11c:1450959..1451600
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AA seq
213 aa
AA seq
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MATAARDPEERIRERNMRLIIKTGIEIFARKGFDGTRIAEIAEASGLPKANVYYYFSSKE
EIYRAIIAHLITSWDEALKYISPEREPAEAFRLYIKAKLDYTRKNIAESRLFASEIIQGA
RFLKKKDRDHMRQVTDAHVAVVEGWIAAGKLLPVDPRHLFIMLWASTQFYADFEPIAADG
LRKARLKAEDYEAAATTITETILKGILPGPVHS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcagcacgggatccagaggagcgcatccgcgaacgcaacatgcgcctcatc
atcaaaactgggatcgagatattcgcgcgcaagggctttgatggtacgcggatcgccgag
atcgccgaggcctcgggcctgcccaaggccaacgtctattactatttctcttctaaggag
gagatctacagggccatcattgcgcacctcattaccagctgggacgaggcgctaaaatat
atttcgcccgagcgtgagccggcggaggccttccggctctacatcaaggcaaagctcgac
tacacgcgcaagaacatcgccgagtcccggctcttcgccagtgagatcattcagggagcg
cggttcctgaagaagaaggatcgcgaccatatgcgccaggtcacggatgcgcatgtggcg
gtcgtggagggttggattgcggccggaaagttgctgccggttgatccgcgccacctgttc
atcatgctgtgggcttcaacgcagttttacgcggattttgagcccatcgccgccgacggg
ctaaggaaggcgcgtttgaaagcggaggattatgaagcagccgcaacgacaattacggag
acgatcctgaaaggcattctacccggcccggtgcacagttga
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