Sinorhizobium meliloti SM11: SM11_pD0046
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Entry
SM11_pD0046 CDS
T01885
Symbol
lacZ1
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00052
Galactose metabolism
smx00511
Other glycan degradation
smx00600
Sphingolipid metabolism
smx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SM11_pD0046 (lacZ1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SM11_pD0046 (lacZ1)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SM11_pD0046 (lacZ1)
Enzymes [BR:
smx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SM11_pD0046 (lacZ1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
Glyco_hydro_2_N
Glyco_hydro_2
Glyco_hydro_2_N2
DUF4982
Big_1
Motif
Other DBs
NCBI-ProteinID:
AEH82879
UniProt:
F7XHX9
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All DBs
Position
pSmeSM11d:complement(53453..55717)
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AA seq
754 aa
AA seq
DB search
MRSVTSFNDSWVFSEGFDAADAGTLRAGQPISLPHNAVELPFNYFDERCYQRAFTYQRVL
AWRPDFSGREVSLVFDAAMADAVVYLNGEEIVAHRDGYTPFEARLTDRLLEGDNLITVKI
DGSENPEIPPFGGRIDYLTYAGIYRDVWLKVTDPVSIANIKIETRDVLSDTKAVSLRCDL
SNPQGLSFSGTISALLKNAAGEVLAEVAGETTGQSLAFEMDGLRGLSLWDIDDPVLYVIE
VELRTGHGSDRFAAHFGFRTAEFTTEGFRLNGRPLKIRGLNRHQSFPYVGYAMGRTAQER
DADIMKHRLHCNLVRTSHYPQSKWFLDHCDRIGLLVFEEIPGWQHIGGEEWKQEAIRNVR
RMIERDWNHPSIVIWGVRINESQDSHDFYAETNRLARELDPTRQTGGVRYITDSEFLEDV
YTMNDFILGNEELPGSNRPRTALRPQQECTGLPRKVPYLITEFGGHMYPTKIYDQEQRQA
EHVRRHLEVLNAAYGDPGISGAIGWCMFDYNTHKDFGSGDRICYHGVMDMFREPKFAAYV
YASQCDPSEEIVMKPVTFWARGERNIGGVLPLIVLTNCDEIELKYGSLTKRVGPDRENFP
HLPHPPVVIDHRHFTKDELGVWGMKWESAEFTGFIAGKPVADLRMAADPVPTTLQVEADS
KTLRAEGRDSVRVILRALDQAGNVLPFLNDAVDIEIHGPARLVGPARIVLQGGSAGFWLE
STGAAGAIVVSVASSRLGAAKLDLVALADGAASA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgttacttccttcaatgattcatgggtcttctccgaaggcttcgacgccgcc
gacgccggaacgctccgggcgggtcagccgatcagcctgccgcacaatgccgtcgaactg
ccgttcaactatttcgacgagagatgctaccagcgcgccttcacctaccagagggttctt
gcctggcgcccggacttctccgggcgcgaggtctcgctcgtcttcgacgcggcaatggcc
gatgcggtcgtgtatctcaacggcgaagagatcgtcgcgcatagggacggctacacgcct
ttcgaggcgcgcctgacggacaggctcctggaaggcgacaatctcatcacggtgaagatc
gacggcagcgaaaatccggagatcccgcctttcggcggccggatcgactatctgacctat
gccggtatctatcgcgacgtctggctgaaggtcaccgatccggtttcgatcgccaatatc
aagatcgaaacccgcgacgtgctctccgacaccaaggccgtctccctccggtgtgacctt
tccaatccgcaagggctatccttctccggcacgatctcggcgctcctcaagaatgcggcc
ggcgaagtgctggccgaggtcgccggcgagacgaccggccagagcctcgcctttgaaatg
gacggcctcaggggcctttccctttgggatatcgatgatccggtgctctacgtgatcgaa
gtcgaactcaggaccggtcacggctccgaccgcttcgccgcgcatttcggcttccgcacg
gcggagttcacgaccgaaggcttccggctcaatggccgcccgctgaagatccgcgggctg
aaccgtcaccaatccttcccctatgtcggctacgccatggggcgcaccgcccaggagcgc
gacgctgacatcatgaagcacaggcttcactgcaatctcgtgcgcacctcgcattacccg
cagtcgaaatggttcctcgaccattgcgaccgcatcgggctcctcgtcttcgaagaaatc
cccggctggcagcatatcggtggggaggaatggaaacaggaggcaatccggaacgtccgc
cgcatgatcgagcgcgactggaaccacccgtcgatcgtcatctggggcgtgcgcatcaac
gagtcgcaggattcgcacgacttctatgccgagaccaatcgcctcgcccgcgagctcgac
ccgacacggcagacgggcggcgtgcgctacatcaccgacagcgaatttttggaagacgtc
tacacgatgaacgacttcatcctcggcaacgaggaactgccgggctcgaaccggccgcgc
acggctcttcgcccgcagcaggaatgtaccgggcttccccgcaaggtgccctatctcatc
accgaattcggcggccacatgtatccgacgaagatctatgatcaggagcagcgccaggcc
gagcatgttcgccggcacctggaggtgctgaatgcggcctatggcgatcccggcatctcc
ggtgcgatcggctggtgcatgttcgactacaacacccacaaggatttcggctccggcgac
cggatctgctatcacggcgtcatggacatgttccgcgagccgaaattcgcggcctatgtc
tatgccagccagtgcgatccctccgaggaaatcgtgatgaagccggtgaccttctgggcg
cgcggtgagcgcaacatcggcggcgtgctgcccttgatcgtgctgacgaattgcgacgag
atcgaattgaaatacggctcgcttaccaagcgcgtcggcccggatcgcgagaatttcccg
cacctgccgcatccaccggtcgtcatcgaccaccgccacttcaccaaggacgagctcgga
gtctggggcatgaagtgggagagcgcggaatttaccggcttcatcgccggcaagccggtc
gccgatctccgcatggccgccgaccccgtgcctacgacgcttcaggtcgaggcggacagc
aagacgctccgtgccgaaggccgcgacagcgttcgcgtcatcctgcgcgcgctcgaccag
gccggcaacgtcctgcctttcctgaacgatgcggtcgacatcgagattcatggtccggcg
cgcctcgtcggaccggcccgcatcgtcctccagggcggttccgccggtttctggctggag
tccacgggcgccgccggcgccatcgtcgtctcggtcgcgtcgtcgcggctcggcgcggcg
aagctcgacctcgtcgccctggcggacggagcggcgagcgcatga
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