Sinorhizobium meliloti SM11: SM11_pD0097
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Entry
SM11_pD0097 CDS
T01885
Symbol
dctD
Name
(GenBank) activator protein
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SM11_pD0097 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smx02022
]
SM11_pD0097 (dctD)
Two-component system [BR:
smx02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
SM11_pD0097 (dctD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA_16
Mg_chelatase
RTP1_C2
AAA
FleQ
Zeta_toxin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AEH82930
UniProt:
F7XIB1
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All DBs
Position
pSmeSM11d:complement(109571..110953)
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AA seq
460 aa
AA seq
DB search
MSAAPSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAELSADFAGIVISDIRMPG
MDGLALFGKVLALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAE
EKRRLVMENRSLRRAAEAASEGLPLIGQTPAMERLRQTLKHIADTDVDVLVAGETGSGKE
VVATLLHQWSRRRTGNFVALNCGALPETVIESELFGHEPGAFTGAVKKRIGRIEHASGGT
LFLDEIEAMPPATQVKMLRVLEAREITPLGTNLTRPVDIRVVAAAKVDLGDPAARGDFRE
DLYYRLNVVTLSIPPLRERRDDIPLLFSHFLARASERFGREVPAISAAMRAYLATHSWPG
NVRELSHFAERVALGVEGNLGVPAAAPASSGATLPERLERYEADILKQALTAHCGDVKET
LQALGIPRKTFYDKLQRHGINRADYVERAGPGRPNAISKT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccccatccgtgttcctgatcgatgacgaccgcgatctgcgcaaggcaatg
cagcagacgctcgagcttgcgggcttcaccgtctcgtccttcgccagcgcgacggaggcg
ctcgccgaactttccgccgacttcgcgggcatcgtcatcagcgatatccgcatgccgggc
atggacggccttgcccttttcggcaaagttctggcgctcgaccctgacctgccaatgatc
ctcgtcacggggcacggcgacataccgatggcggtgcaggcgatccaggacggcgcctat
gacttcatcgccaagccgtttgccgccgatcgtcttgtccagagcgcccggcgcgcagag
gagaagcggcggctcgtcatggagaaccggtcgctgcgccgcgcggccgaggccgcatcc
gaaggcctgccgctgatcggccagacgccggccatggagcggcttcgccagaccttgaaa
cacatcgccgacaccgatgtcgacgtgctggtcgccggcgagacgggcagcggcaaggag
gtcgtcgccacgctgctgcaccaatggagccgccgcaggaccggcaacttcgtggcgctg
aattgcggcgctctgccggaaacggtgatcgaaagcgagctcttcggccacgagcccggc
gccttcaccggcgccgtcaagaagcggatcggccggatcgagcatgcgagcggcggcacg
ctcttcctcgacgagatcgaggccatgccgccggcaacgcaggtgaagatgctgcgcgtg
ctcgaagcccgcgagatcacgccgctcggcaccaacctgacccgcccggtcgacatccgc
gtcgtcgccgccgccaaggtcgatctcggcgacccggccgcacgcggcgatttccgcgag
gatctctattaccggctgaacgtcgtgacgctctcgatcccgcccctgcgcgaacggcgc
gacgacatccccctcctcttctcccatttcctggcccgcgcctcggaacgcttcggccgc
gaagtgcccgcgatctcggctgccatgcgcgcgtacctggcgacgcattcctggcccggc
aatgtgcgcgagctttcgcacttcgccgaacgggtggcgctgggggtggagggaaacctg
ggagttccggccgcagcgcccgcctcaagcggagcgaccctgccggaaagattggaacgc
tacgaggccgatatcctcaagcaggcgctcacggcgcattgcggcgacgtcaaagagacc
ctgcaagccctcggcatcccccgcaagactttttacgacaagctgcagcgccatgggatc
aaccgggcagattatgtcgaacgggcgggcccggggcgtcccaatgccatatcgaaaact
tga
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