Sinorhizobium meliloti SM11: SM11_pD0194
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Entry
SM11_pD0194 CDS
T01885
Name
(GenBank) putative transcriptional regulator, LacI family protein
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smx03000
]
SM11_pD0194
Transcription factors [BR:
smx03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SM11_pD0194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AEH83027
UniProt:
F7XIT9
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All DBs
Position
pSmeSM11d:220056..221081
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AA seq
341 aa
AA seq
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MSDSTPATIEDVARIAEVSIATVSRAIHNPEKVAKSTRLKVNQAIAITGYTTNAMARSLR
LGRSNMILVVAPDIGDPNFSSILVGLENEARSHGYGVLIGHTQNDAQRAVEYLKFLNSNQ
AAGLILFTGILPFGHETIAARLPPSVGIFEPVFNGGIPYVGVDDVEGARKVVDLLIAEGH
RKIAFIGDSRTRLAYKRRRSGYDAGLDAAEVPAELRLVQEGDGTLESGRAAVERLFVRDT
LPTAFMCVNDQTALGVMIGLKARGYDIPRDFSVTGFDDVPQATFMTPALTTIRQPRTLIG
KHAMALLLELLSDRRPAETEIFLRPDLVVRNSVSAPSPRWA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattccacgcccgcaaccatcgaagacgtcgctaggatcgctgaagtttcgatc
gcgacggtatcgcgggcaatccacaacccggagaaggttgcgaaatccacgcggctgaag
gtcaaccaggcgatcgcgatcaccggttacaccaccaatgccatggcacgcagcctgcgc
ctcggccgctcgaacatgatcctggtcgtcgctcctgatatcggcgatccgaacttttct
agtattctggtcggcctcgaaaacgaggcacggtcgcacggctacggcgtgctgatcggc
catacccagaacgacgcccagcgcgcggtcgaatatctgaagtttcttaactccaaccag
gcggcgggtctgatcctctttaccggcatcctgcccttcggccacgagacgatagcggcg
cggctgccgccgagcgtcggcatcttcgagcccgtcttcaacggcggcataccctatgtg
ggtgtcgacgatgtcgagggcgcccgcaaggtggtcgatctcctcatcgccgaaggccat
cgcaagatcgctttcatcggcgattcgcgaacccgtcttgcctataagcggcgccgctcc
ggctatgatgcgggcctcgatgcggcggaggtgccggcggaacttaggctggtccaggag
ggcgatggcacgctcgagagcggcagggctgccgtcgagcggctcttcgttcgcgacacg
ctgccgacggcattcatgtgcgtcaacgatcagacggcactcggagtgatgatcgggctg
aaggcacgcggctatgacataccgcgcgatttctcggtgacaggattcgacgacgtgcct
caggcgacattcatgacgccggccctgaccacgatccgtcagccgcgcaccctgatcggc
aaacacgccatggcgcttctgctggagcttctctccgaccggcgccccgccgaaacggaa
atcttcctgaggcccgatctggtggtgcgcaattccgtttcggcgccgtctcctcggtgg
gcttag
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