Sinorhizobium meliloti SM11: SM11_pD0849
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Entry
SM11_pD0849 CDS
T01885
Name
(GenBank) putative pectate lysase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00040
Pentose and glucuronate interconversions
smx01100
Metabolic pathways
smx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SM11_pD0849
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM11_pD0849
Enzymes [BR:
smx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SM11_pD0849
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AEH83681
UniProt:
F7XGK5
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All DBs
Position
pSmeSM11d:complement(917589..919037)
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AA seq
482 aa
AA seq
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MTVSYQAHDVRAFGFTIARCLILAGLACGSWVGFSRQALAQAALAEPLSPKLPDGRQRAF
PTAEGFGAGSLGGRGGKVIYVVNTNESGQGSLRACIEASGPRICIFRTGGTIVLREGSLV
VRHPFLTIAGETAPGGGIAIRNGETQIRPSIEIVTNDVIIRHIRLRPGPHAVKACCSGGL
GMYSSSAKDIMLDHISASWGSDETIDSEDASNFTWQWGIASEPLLRGGPGKDKRARNMLF
TKGGNVSVHHSLFAFGQFRNPLIKMKIPGAVADVVNNVFFSPKWQYVLSFGDEWARIQAN
VVGNYKIAGEKLRDDHMVHLFEESGRGHAIYLKDNYDEPYRTGASEDDTLVLAEKQRRFV
STSAFDAPAVRASAPEIAYEDVLAGAGATKPRRDAVDRRITKAVRNRSGRLLVNDPQDVG
GWPELDAGVPYPDSDMDGISDDWEVESGTDPADASDGRQDLDGDGWTNLEAFLHFMAGDT
AD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagctaccaagcgcatgacgtaagggcatttggtttcaccatagcgcgttgc
ctgattttggcggggttggcctgcggatcatgggtcggcttctcgcggcaagctctagcc
caggcggcactggccgagcctctttcacccaagcttccggacggcagacaacgcgccttt
cccacggccgaaggcttcggcgccggctctcttggaggccgggggggtaaggtgatctat
gtcgtcaacacaaacgaatcagggcagggctccttacgtgcgtgcatcgaggcatccggc
ccgcgcatttgtattttccgcacgggtggcaccattgttcttcgcgaaggatcgctggtc
gtccgacatccattcctgacgattgccggagagacggcgccgggcggcgggatcgccatc
cggaacggcgagacgcaaattcgtccttcaatcgaaatcgtgaccaatgacgtgatcatc
aggcacattcgtcttcgccccggtccgcatgccgtgaaggcttgctgttccggaggcctc
ggaatgtactccagctcggcgaaggacatcatgctcgatcatatctccgccagctgggga
tcagacgagacgatcgattcggaagacgcgagtaacttcacctggcagtggggtattgcg
agcgaaccgttgctgcggggcggccccgggaaagacaagcgtgcgcgcaacatgttgttc
acgaagggcggcaacgtctccgtgcatcactctctcttcgctttcggccagttcagaaac
cccctgataaagatgaagattcccggcgccgtcgccgatgtcgtgaacaacgtgtttttc
tcaccgaagtggcaatatgtcctaagcttcggcgatgaatgggcgcggatccaggctaat
gtggtcggcaactacaagatcgcgggggaaaagctgcgagacgatcatatggttcatctc
ttcgaagaaagcggacgcgggcacgcgatctatttgaaggacaattacgacgaaccatat
cgcactggcgccagcgaggatgacaccctcgttttggccgagaaacaaagaagattcgtt
tcaacgtcggcattcgatgcaccggcggtccgcgcttctgcgcccgaaattgcttacgag
gacgtcctggcaggtgccggtgcgacgaagcctcggcgcgacgcggtcgatcgccgcatc
accaaggcggtcagaaatcgcagcggacgactgctcgtgaacgatccgcaggacgtcggc
ggttggccggaactcgatgccggggtgccgtacccggacagcgacatggacggtatctcg
gatgactgggaggtcgaaagcggcaccgatccggcagatgccagcgatgggcgacaggac
ttggatggcgacggatggacaaatctcgaagcgtttctccatttcatggcgggcgatacc
gcggattaa
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