Sinorhizobium meliloti SM11: SM11_pD1004
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Entry
SM11_pD1004 CDS
T01885
Symbol
rmlC2
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00521
Streptomycin biosynthesis
smx00523
Polyketide sugar unit biosynthesis
smx00541
Biosynthesis of various nucleotide sugars
smx01100
Metabolic pathways
smx01110
Biosynthesis of secondary metabolites
smx01250
Biosynthesis of nucleotide sugars
Module
smx_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SM11_pD1004 (rmlC2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SM11_pD1004 (rmlC2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SM11_pD1004 (rmlC2)
Enzymes [BR:
smx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SM11_pD1004 (rmlC2)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEH83836
UniProt:
F7XH10
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All DBs
Position
pSmeSM11d:1076256..1076840
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AA seq
194 aa
AA seq
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MSLVVIRSLGLDGVLEILPGRIEDERGFFSETWNERKLAEAGIALHFVQDNHSFSAAKGV
LRGLHHQLSPYAQDKLVRVIRGAIFDVAVDIRRGSPTFAQWVAAEVSARKWNQILIPKGF
SHGFLTLEPNTEVIYKVTNPYSPAYDRSIRFDDPEIAIAWPLPVAEFQLSGKDAAAPPLG
QAELFNFPVEGARL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtcgtcatcagatcgcttggcctcgacggggtcctggagatcctgccgggc
aggatcgaggacgaacgtggcttcttctctgaaacttggaacgagcgcaaattagccgaa
gccgggatcgcgttgcacttcgttcaggacaatcattccttctcggccgcgaaaggcgtc
ctgcgcggacttcaccaccaactctcaccctacgcgcaggacaagctggtcagggtgata
agaggcgccatcttcgacgtcgcagtggacattcgccgtggctcgccaaccttcgcgcaa
tgggtcgcggccgaggtttccgctcgcaagtggaaccaaatcctgatcccaaagggtttt
tcgcacggcttcctgacgctcgaaccgaacacggaggtgatctacaaggtcaccaaccca
tattcaccagcttacgatagatcgatccgttttgacgatcccgagatcgcaatcgcctgg
ccactgccagttgccgaattccagctgtctggcaaggacgcggcggctccgccgctgggg
caagccgaactgttcaacttcccggtggagggggcccggctatga
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