Sphingomonas melonis: BJP26_00250
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Entry
BJP26_00250 CDS
T04509
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
smy
Sphingomonas melonis
Pathway
smy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJP26_00250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_00250
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJP26_00250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_16
AAA_22
AAA_15
AAA_29
ABC_tran
AAA_27
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AOW22176
UniProt:
A0A175Y078
LinkDB
All DBs
Position
47961..49016
Genome browser
AA seq
351 aa
AA seq
DB search
MLSRLILTDFRNHAELVLAPAPGFVVLTGENGAGKTNVLEAVSLLSPGRGLRRASLSAMQ
RQHGPGGFGIAATLALPDGDVEIATGTLAAAPERRQLRIQGAAATANTLAEWLTVLWLTP
AMDRLFVEPAGERRRFLDRLTLALVPAHAQHAARYDAAMRARTRLLTADEPADPQWLSAL
EAQMAQHGAAVDAARRETVAALGERLAEQPDGPFARAALLLEGWSGTADALLADLRSGRA
RDAAAGRALAGPHRADLAVTHLGKGQAAALASTGEQKALLLGIVLAHAELVASRTGHAPI
LLLDEVAAHLDPLRRAALFERLASHGQVWMTGTEPALFAAIGAEATRIALG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgcgcctgatcctcaccgatttccgcaaccatgcggagctggtgctggcgccc
gcccccggcttcgtcgtgctgaccggagagaatggcgcgggcaagaccaacgtgctggaa
gcggtgtcgcttctgtcccccggccgcggcctgcgccgcgcgtcgctgtcggcgatgcag
cggcagcacgggccgggcggattcggcatcgcggcgacgctggcgctgcccgatggcgat
gtcgagatcgcgaccggcacgctggcggcggcgcccgaacggcgccagctgcgcatccag
ggcgccgccgcgaccgccaatacgctggccgaatggctgaccgtcctgtggctcaccccc
gcgatggaccggctgttcgtcgagccggcgggcgagcggcgccgcttcctcgaccggctg
acgctggcgctggtgccggcgcatgcgcaacatgccgcgcgctacgacgccgcgatgcgc
gcccgcacccggctgttgacggcggacgagccggccgatccgcaatggctctccgcactc
gaggcgcagatggcgcagcatggcgcggcggtcgatgccgcgcggcgtgagacggtagcg
gcgctcggcgagcggctggcggagcagcccgacgggccgttcgcgcgcgcggcgctgctg
ctggaggggtggagcggcaccgccgacgcgctgcttgccgatctgcgaagcggccgcgcc
cgcgatgcggcggccggccgcgcgcttgccgggccccatcgcgccgaccttgcggtgaca
catcttggcaagggacaggccgcggcgcttgcctccaccggcgaacagaaggcgctgctg
ctcggcatcgtcctcgcgcatgccgaactggtcgccagccgcaccggccatgcgccgatc
ctgctgctcgacgaggtggcggctcacctcgacccccttcgccgtgccgcactgttcgaa
cggctcgcgagccatgggcaggtgtggatgaccggcacggagcccgcgctgttcgccgcg
atcggcgcagaggcgacgcgcatcgcgctcggctga
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