Sphingomonas melonis: BJP26_01395
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Entry
BJP26_01395 CDS
T04509
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
smy
Sphingomonas melonis
Pathway
smy02020
Two-component system
smy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP26_01395
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJP26_01395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smy02022
]
BJP26_01395
02035 Bacterial motility proteins [BR:
smy02035
]
BJP26_01395
Two-component system [BR:
smy02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BJP26_01395
Bacterial motility proteins [BR:
smy02035
]
Flagellar system
Flagellar assembly proteins
Others
BJP26_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
HTH_28
AAA_5
AAA_16
Sigma70_r4_2
AAA_2
AAA
HTH_23
AAA_7
MCM
NPIP
AAA_3
Xre-like-HTH
HTH_24
T2SSE
HTH_29
HTH_Tnp_1
MerR
Parvo_NS1
TIP49
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AOW25429
UniProt:
A0A175Y5A4
LinkDB
All DBs
Position
268159..269478
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AA seq
439 aa
AA seq
DB search
MRSIFPSAAVMQRKYALVSGLRAQGFGIGSFESGQPAATDLFLVAEGEAPPAPARTVIIG
DGPRHVVPSQGGNPARIAFGPEDAAVGNGFARALVAGPDTPTAADPESLALLALAERVAQ
ADITVLINGPTGTGKEVLARAIHNNSPRKNGPFVAINCAALPETMLEALLFGHQKGAFTG
ASSGGEGFFRAADGGTILLDEIAEMPLQLQAKLLRVLQEREVVPIGASVPQPIDVRVVAC
ANRDLQAEVAAGRFRADLYYRLSVFPLSTKPLADRTQDIPALAATMILRHAGTRAVVPWP
TAEAVETLIRHDWPGNVRELENVIQRALLFAGGDTIEASHIVFDRPISFTFRETSPVTPL
FAVAPAAPALPAEPATLGNVVQMSEFQAIREMLAACGGSRVETARRLGISERTLRYRLAK
AREQGDDLARPATAWAASA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgatttttccttccgctgcagtgatgcagcgcaaatatgcgctcgtttcgggc
ctgcgcgcccagggcttcgggatcggatcgttcgaatccggccagcccgcagccaccgac
ctgttcctggtcgccgagggcgaggccccgccggccccggcgcgcacggtcatcatcggc
gacggcccgcgccacgtcgtgccctcgcagggcggcaatccggcgcgcatcgccttcggt
cccgaagacgccgcggtcggcaacggctttgcccgcgcgctggtcgccggccccgacacg
cccactgccgcggaccccgagagcctggcgctgctggcgctggccgaacgcgtcgcgcag
gcggacatcaccgtgctgatcaacgggccgaccggcaccggcaaggaagtgctggcgcgc
gccatccacaacaattcgccccgcaagaacgggccgttcgtcgcgatcaactgcgccgcg
ctgcccgaaaccatgctggaggcgctgctgttcggccaccagaagggcgcattcaccggc
gcctcgtcgggcggcgaaggcttcttccgcgcggccgacggcggcacgatcctgctcgac
gagatcgccgagatgccgctgcaattgcaggccaagctgctgcgcgtgctgcaggagcgc
gaggtggtgccgatcggcgcctccgtgccgcagcccatcgacgtacgcgtcgtcgcctgc
gccaaccgcgacctgcaggccgaagtcgccgcgggccgcttccgcgccgatctctactac
cgcctgtcggtcttcccactcagcaccaagccgcttgccgaccgcacgcaggacattccg
gcgctcgccgcgacgatgatcctgcgccatgccggaacccgcgcggtggtgccgtggccg
accgccgaggcggtcgagacgctgatccgccacgactggccgggcaacgtgcgcgagctg
gagaacgtgatccagcgcgcgctgctgttcgccggcggcgacacgatcgaggcgagccac
atcgtgttcgaccgcccgatcagcttcaccttccgcgaaaccagcccggtgacgccgctg
ttcgcggtcgcgcctgccgcccctgccctgcccgccgagccggcgaccctgggcaatgtg
gtgcagatgagcgaattccaggcgatccgcgagatgctggccgcgtgcggcggcagccgc
gtcgagaccgcgcggcgcctgggcatctccgagcgcacgctgcgctatcgcctcgccaag
gcgcgcgaacagggtgacgacctcgcccggcccgccactgcctgggcggcttcggcatga
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