Sphingomonas melonis: BJP26_01855
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Entry
BJP26_01855 CDS
T04509
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smy
Sphingomonas melonis
Pathway
smy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP26_01855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_01855
Enzymes [BR:
smy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BJP26_01855
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJP26_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AOW22456
LinkDB
All DBs
Position
356714..358111
Genome browser
AA seq
465 aa
AA seq
DB search
MRIITLPAPDDFDAWRDAARPLAAADVPPDDIVWQVGDTPADLFATAADDAPAPPPPSGT
LSVPRAFIDLARSVVLSSDPERFALLYTALARLRREPKLIEDQADPLVRRLEGLAKSVRR
DIHKMRAFLRFREEQDDEGTRYVAWFEPDHHIVRANAAFFVNRFASMRWSILTPEVSLHW
DGKALAEGPGAQKADAPDGDPTEEVWKTYYASIFNPARVKIGAMLKEMPRKYWKNMPETA
LVGQLIAGAQARESGMITQSREAPAIGDNATAAWAALRDEAAACTRCHLYKHATQTVFGE
GPVDAPLMFVGEQPGDQEDLAGTPFVGPAGQVFNRAIAEAEIDRARVYVTNAVKHFKFEQ
RGKRRIHAKPDTGEIQACRWWIEQEQMLIRPRVTVALGATAARSLLGRTVTIGRERGKAI
ALPDGGEAWITVHPSYLLRLPDETQKAEEYARFVEDLKQAKAALG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataatcaccctccccgcccccgacgatttcgacgcgtggcgcgacgccgcccga
cccctcgccgcagcggacgtccccccggatgacatcgtctggcaggtcggcgacaccccc
gccgacctgttcgccaccgccgccgacgatgcccccgcaccgccgccgcccagcggcacc
ctctccgtcccccgcgccttcatcgatctcgcccgcagcgtcgtgttgtcgagcgacccc
gaacggttcgcgctcctctacaccgcgctcgcccgcctgcgccgcgaaccgaaactgatc
gaggatcaggccgacccgctcgttcgccgtctcgaaggcctcgccaaatcggttcgccgc
gacatccacaagatgcgcgcctttctccgcttccgcgaggaacaggacgatgagggcacg
cgctacgtcgcctggttcgagcccgaccatcacatcgtccgcgccaacgccgccttcttc
gtcaaccgcttcgccagcatgcgctggtcgatcctgacgcccgaggtctcgctccactgg
gacggcaaggcgctggccgaaggacccggcgcgcaaaaggcggacgcccccgacggcgat
cccaccgaagaggtgtggaagacctattacgccagcatcttcaatcccgcgcgcgtcaag
atcggcgcgatgctgaaagagatgccgcggaagtattggaagaacatgcccgaaaccgcg
ctggtcgggcagctgatcgccggcgcacaggcacgggaaagcggcatgatcacccagtca
cgcgaggcgccggccatcggcgacaatgccaccgccgcctgggcggcgttgcgcgacgaa
gcggcggcctgcacccgctgccacctctacaagcacgcgacgcagaccgtcttcggcgaa
ggcccggtcgatgcgccgctgatgttcgtcggcgaacagccgggcgatcaggaggacctc
gccggcacgccgttcgtgggccccgccgggcaggtcttcaaccgcgccatcgccgaagcc
gagatcgaccgcgcccgcgtctacgtcaccaatgcggtgaagcacttcaaattcgaacag
cgcggcaagcgccgcatccacgccaagcccgacaccggcgaaatccaggcctgccgctgg
tggatcgaacaggaacagatgctcatccgcccgcgcgtcacggtcgcgctcggcgccacc
gccgcgcgctcgctgctcggccgaacggtgacgatcggccgcgaacgcggcaaagcgatc
gccctccccgacggcggcgaagcctggatcaccgtccaccccagctatctactgcgcctg
cccgacgaaacgcaaaaggccgaggaatacgcgcgcttcgtcgaggacctgaaacaggcg
aaggcggcgctaggctga
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