KEGG   Sphingomonas melonis: BJP26_02420
Entry
BJP26_02420       CDS       T04509                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
smy  Sphingomonas melonis
Pathway
smy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJP26_02420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smy03400]
    BJP26_02420
Enzymes [BR:smy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BJP26_02420
DNA repair and recombination proteins [BR:smy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BJP26_02420
 Prokaryotic type
     BJP26_02420
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AOW22561
UniProt: A0A175Y4N5
LinkDB
Position
complement(480343..481050)
AA seq 235 aa
MDVADIGRRLDPSWRTALDPVLAGEAMADLRRFLTAEEAAGKAILPPPHDWFRALELTPL
DAVKVVILGQDPYHGPGQAHGLSFSVQPGVKVPPSLRNIFKELHDDLGVAPPGHGHLERW
ARAGVLLLNSVLTVEHGRAAAHAGRGWEAFTDAVIRAVAAKPEPVVFLLWGAHAQKKAAF
VTYVAHGGRHLVLRSPHPSPLSAYTGWFGSKPFSQANAFLTAHGRGPVDWALPAT
NT seq 708 nt   +upstreamnt  +downstreamnt
atggacgtggcggacatcggccggcggctggacccgagctggcgcacggcgctcgacccg
gtcctggcgggtgaggcgatggcggacctgcgccgcttcctgaccgcagaagaggcggcg
gggaaggccatcctgccgccgccgcacgactggtttcgggcgctggagctgacgccgctc
gatgcggtgaaggtcgtgatcctggggcaggacccgtaccatgggccggggcaggcgcat
ggcctgagcttttcggtgcagccgggggtgaaggtgccgccgtcgctgcgcaacatcttc
aaggaattgcacgacgatctgggcgttgccccgccgggccacgggcatctggagcgctgg
gcgagggcgggcgtgctgctgctcaacagcgtgctgaccgtcgagcacggacgcgccgcg
gcgcatgccggccgggggtgggaggcgttcaccgatgcggtgatccgcgcggttgcggcc
aagccggagccggtcgtgttcctgctgtggggcgcgcatgcgcagaagaaggcggcgttc
gtcacctacgtggcgcacggcgggcggcatctggtgctgcgatcgccgcacccgtcgccg
ctgtcggcgtataccggctggttcggcagcaagccgttcagccaggcgaacgccttcctg
accgcgcacggccgcgggccggtggactgggcattgcccgcgacgtga

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