Sphingomonas melonis: BJP26_04405
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Entry
BJP26_04405 CDS
T04509
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
smy
Sphingomonas melonis
Pathway
smy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJP26_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_04405
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BJP26_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOW22899
UniProt:
A0A175XZ03
LinkDB
All DBs
Position
complement(884310..885068)
Genome browser
AA seq
252 aa
AA seq
DB search
MRPQPQIVRVIDLETTGSAPPAHGVCEIGWQDVALGADGRWELQGEGGSILVNPGRAIPP
ITQAIHHILDEDVADAPWWHDVARRVLDPYPRRVALAAHRADFEQQFCTPSLTHGQEWIC
TWKCALRLWPDSPSFSNQVLRYYRRPEGLDQQRGLPVHRAFPDAYVTAHHLRDQLNEAGL
AQCLDWSRTPGLIPRVRYGPYRGKAWSELDHESLMAFLTDRDPDIRFTANAEMDRRSGGG
AVGRASAQDLLL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccccagccccagatcgtccgcgtcatcgacctcgaaaccaccggcagcgcgccg
ccggcgcatggtgtatgcgaaatcggctggcaggacgtcgcgctcggcgccgatggccgc
tgggagctacagggcgagggcggctcgattctggtcaatcccggccgcgccatcccgccg
atcacgcaggcgatccaccatatcctcgacgaggatgtcgctgacgcgccctggtggcac
gatgtcgcgcgccgcgtgctcgatccctacccgcgccgcgtcgcgctcgccgcgcatcgg
gcggacttcgaacagcaattctgcacgcccagcctgacccacgggcaggagtggatctgc
acctggaagtgcgcgctgcgcctgtggccggacagccccagcttttccaaccaggtgctg
cgctattaccgccgccccgaggggctggaccagcagcgtggcctgcccgtccaccgcgcc
ttccccgacgcctatgtcaccgcgcaccatttgcgggatcagctcaacgaggcgggcctc
gcgcaatgcctcgactggtcgcggacccccggcctgatcccgcgcgtccgctacggcccc
tatcgcggcaaggcgtggagcgagctcgaccacgaaagcctgatggccttcctgaccgat
cgcgatcccgacatccgcttcaccgccaatgccgaaatggatcgccgcagcggtggcggc
gccgtgggacgtgccagcgcgcaggacctcttgctgtag
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