Sphingomonas melonis: BJP26_04980
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Entry
BJP26_04980 CDS
T04509
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smy02000
]
BJP26_04980
Transporters [BR:
smy02000
]
Other transporters
Pores ion channels [TC:
1
]
BJP26_04980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AOW22998
UniProt:
A0A175Y155
LinkDB
All DBs
Position
1004937..1006862
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AA seq
641 aa
AA seq
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MTVRLSVSVVRPSLLTLGLLLAAPAAAQIAPTADPANSDDIVVTATRVAQPAAEVGQAVT
VITRDEIDRRQTVSVADLLSTTPGVTVTRNGSLGGFTGVRLRGAEAEQTLVVIDGVRVND
PSSPGGGFDFANLLSASVQRIEVLRGPNSVPWGSQAIGGIVNVITEEPTERLKARASAEY
GYADSLYAQGGISGRSGAISGALTGGYLRSDGISAAANGTERDGYRQYGATGRLGVDFTD
GIGLDLRGYWADSKTQTDGYPAPNYILADDPSFSTANELYGYAGLHANFGTFRNRVAFTI
ADINRDTYAKPGATPSPFRGRSERYEYQGDYQPIDQVRIVAGVEHEDSRYRDATLRRSVG
ITSVYGEAIVKPFDALTLTGGVRNDDHETFGNHTTFGADAALALRTGTTLRASYGEGFKA
PTLYQLYSPYGNTRLDPETARNWDAGIEQALLDGRARVSATYFNRDTRNQISFRGCSGAE
QNTSGSICVNRPFGVYDNIQRTHAEGVEFAIGLRPVDALTVSANVSYIDAENRTPGTAFR
TDLLRRPKETAAFVVDYRLPFGLGIGGTVQIVGDSFDSDSYGSRVRVDGYALASVRAELP
IGDRLSIYGRIDNVTDARYQTVAEYGTYGRAAYGGVRVKLD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgcctatccgtttccgttgtccgtccgtcgctgttgacgctcggcctgctg
ctcgccgcgcccgccgccgcgcagatcgcgccgaccgccgatcctgcgaacagcgacgac
atcgtcgtcaccgcgacccgcgtcgcccagcccgctgccgaagtcggccaggccgtgacc
gtcatcacccgcgacgagatcgatcgccgccagaccgtgtcggtcgccgatctgctgtcg
accacccccggcgtcaccgtgacgcgcaatggcagcctgggcggcttcaccggcgtgcgc
ctgcgcggcgcagaggcggagcagactttggtcgtgatcgacggcgtgcgcgtcaacgat
ccctcgtcgcccggcggcggcttcgacttcgccaatctgctgtcggcgagcgtccagcgc
atcgaagtgctgcgcggccccaattcggtcccctggggcagccaggcgatcggcggcatc
gtcaacgtcatcaccgaagaaccgaccgagcggctgaaggcgcgcgccagcgccgaatat
ggctatgccgacagcctttacgcgcaaggcggcatctcgggtcgcagcggcgcgatctcg
ggcgcactgaccggcggctatctgcgcagcgacggcatctcggccgcggccaacggcacc
gagcgcgacggctatcgccagtacggcgcgaccggccgcctgggcgtcgacttcaccgac
ggcattggcctcgacctgcgcggctattgggccgacagcaagacgcagaccgacggctat
cctgcgcccaactacatccttgccgacgaccccagcttctcgaccgcgaacgaactgtac
ggctatgccggcctgcacgcgaacttcggcacgttccgcaaccgcgtcgccttcaccatc
gccgacatcaaccgcgacacctatgccaagcccggcgccaccccgtcgccgttccgcggc
cgctcggaacgctacgaatatcagggcgattatcagccgatcgatcaggtccgcatcgtc
gccggcgtcgagcatgaagacagccgctaccgcgacgcgacgctgcgccgctcggtcggc
atcaccagcgtctatggcgaagcgatcgtgaagccgttcgacgcactgaccctgaccggc
ggcgtccgcaacgacgaccatgagacgttcggcaatcacaccactttcggcgccgacgcc
gcgctggcgctgcgcaccggcacgacgctgcgggcgagctatggcgagggcttcaaggcg
ccgaccctgtaccagctgtacagcccgtacgggaacacacgcctcgatccggaaaccgcg
cgcaactgggatgccggcatcgaacaggcgctgctcgacggtcgcgcccgcgtctcggcg
acctatttcaaccgcgacacgcgcaaccagatcagcttccgcggctgctcgggcgccgag
cagaacaccagcggttcgatctgcgtcaaccgcccgttcggcgtctacgacaacatccag
cgcacccatgccgagggcgtggagttcgcgatcggcctgcgccccgtcgacgcgctgacc
gtgtcggccaacgtgtcgtacatcgatgcggaaaaccgcacgcccggcaccgccttccgc
accgatctgctgcgccggcccaaggaaaccgcggcgttcgtcgtcgactatcgcctgccc
ttcggtctgggtatcggtggcaccgtgcagatcgtcggcgacagcttcgacagtgacagc
tacggcagccgcgtgcgcgtcgacggctatgcgctggccagcgtccgcgccgaactgccg
atcggggatcgcctgtcgatctacggccgcatcgataacgtcaccgacgcgcgctaccag
acggttgccgaatacggcacctacggccgcgccgcctatggcggcgtgcgcgtgaagctg
gactga
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