Sphingomonas melonis: BJP26_05120
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Entry
BJP26_05120 CDS
T04509
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smy
Sphingomonas melonis
Pathway
smy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJP26_05120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_05120
Enzymes [BR:
smy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP26_05120
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJP26_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Flavi_DEAD
AAA_30
Zn_ribbon_6
HCV_NS5a_1b
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AOW25473
UniProt:
A0A175Y3E6
LinkDB
All DBs
Position
complement(1039441..1041612)
Genome browser
AA seq
723 aa
AA seq
DB search
MSSRARVLVLNSALGPLDYRVPAGSHVEPGSVVIAPLGPRQLLGVVWEPERMPSDAEVGD
NRLRPLLGVVDVPPLAAPLRRLIEWAADYYLAPPAAVVRMALASTSALEGARTVTEYRAT
GTVPPRLTPQREQALERIGDRQGLIRELATLADVSDAVVRGLVKAGALEAVSVDIDSPYP
HPDPAFGPPTLAEAQQAAADELVAGVAAHEFRPTLLDGVTGSGKTEVYFEAVAEAIRQGR
QTLVLLPEIALTEPFLKRFHDRFGCEPVAWHSGLRSTQRRRAWRAIASGEALVTVGARSA
LFLPYRNLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGKFEQCPVILASATPAIETRQQ
VALGRYAELKLPGRYGPAEMPTIEAIDLIQHPPERGTWIAPKLVTALRETFEKGEQSLLF
LNRRGYAPLTLCRNCGHRFQCPNCTAWMVEHRLTRRLACHHCGHVMPTPRACPECKAEDS
LVACGPGVERIADEVATLFPEAKTAVVTSDTIWSPAKAAEFVGRMEAGDIDIVVGTQLVT
KGYHFPNLTLVGVIDADLGLEGGDLRAAERTFQQIRQVSGRAGRGAKPGHVFIQTHSPSA
QVMQALITGDAEAFYEAETEARRDAGAPPFGRYAAIVVSSEEQACAHEVARAVAQSAPRV
DGMAVYGPAPAPLAMLRGRHRYRLLVHARRALDVQDVIRDWLGGLDWPAKARVTVDVDPY
NFL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgcgcccgcgttctcgtcctcaattccgcgctcggcccgctcgactatcgc
gtgccggcgggctcgcatgtcgagccgggatcggtggtcatcgcgccgctgggtccgcgt
cagttgctcggcgtggtgtgggagcccgagcggatgccatcggatgcggaggtcggcgac
aaccgcctgcggccgctgctcggcgtggtcgacgtgccgccgctcgccgcgcccttgcgc
cggctgatcgagtgggcggcggattattatctcgcgccgcccgccgccgtggtgcggatg
gcgctcgcctccacctccgcgctggagggggcgcggaccgtcaccgagtatcgcgccacc
ggcaccgtgccgccgcgcctcaccccacagcgcgagcaggcgctggagcggatcggcgac
cggcaaggcctgatccgcgagctcgccaccctcgccgacgtgtccgacgcggtggtccgt
gggctggtgaaggccggcgcgctggaggcggtgagcgtcgatatcgacagcccctatccg
catcccgacccggccttcggtccgccgacgctggccgaggcgcagcaggccgccgcggac
gagctggtcgccggggtcgccgcccatgaattccgccccaccctgctcgacggcgtcacc
ggatcgggcaagaccgaggtgtatttcgaggcggtggccgaagcgatccggcaggggcgg
cagaccctcgtgctgctgcccgagatcgcgctgaccgaaccgttcctgaagcgcttccac
gaccgtttcggctgcgagccggtggcgtggcattcgggcctacgctccacccagcgacgg
cgggcgtggcgcgcgatcgcgagcggcgaggcgctggtgacggtgggcgcgcggtccgct
ttgttcctgccctatcgcaacctcggcctgatcgtcgtcgacgaggcgcacgagacgagc
ttcaagcaggaagagggcgtccattaccatgcccgcgacgtcgcggtgatgcgcggcaag
ttcgagcaatgcccggtgatcctggccagcgcgaccccggcgatcgagacgcgccagcag
gtggcgctgggccgctatgccgaactgaagctgcccggccgctacggccccgccgagatg
ccgacgatcgaggcgatcgacctgatccagcacccgcccgaacgcggcacgtggatcgcg
ccgaagctggtgacggcgctgcgtgagacgttcgagaagggcgagcagtcgctgctgttc
ctcaaccgtcgcggctatgcgccactgacgctgtgccgcaattgcgggcaccgcttccaa
tgccccaattgcaccgcctggatggtggagcatcgcctcacccgccggctggcctgccac
cattgcggccatgtgatgccgacgccccgcgcctgcccggagtgcaaggcggaggacagc
ctggtcgcctgcggtcccggcgtcgagcgaatcgcggacgaggtggcgactttgttccct
gaggcgaagaccgcggtcgtcaccagcgacacgatctggtcgccggccaaggctgcggag
ttcgtcggccggatggaagcgggcgacatcgacatcgtcgtcggcacgcagctcgtcacc
aagggctatcactttcccaatctgacattggtcggcgtgatcgatgccgatctggggctg
gagggcggcgacctgcgggcggcggaacggacgttccagcagattcggcaggtgtcgggg
cgtgcggggcgtggagccaagccggggcatgtgttcatccagacgcacagtccgtcggcg
caggtgatgcaggcgctgatcaccggcgatgccgaggccttctacgaggcggaaaccgag
gcgcgtcgcgatgccggcgctccgccctttggccgctatgccgcgatcgtcgtgtcgtcg
gaggagcaggcgtgtgcgcatgaggtggcgcgtgcggtggcgcagagcgcgccacgggtg
gatggtatggcggtctatggccccgcccctgccccgctcgccatgctgcgggggcggcat
cgctatcggctgctggtgcatgcccggcgcgcgctcgacgtgcaggacgtgatccgcgac
tggctgggcgggctcgactggccggcgaaagcgcgcgtgacggtggacgtcgatccgtat
aacttcctgtaa
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