Sphingomonas melonis: BJP26_07525
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Entry
BJP26_07525 CDS
T04509
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_07525
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJP26_07525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
AAA_16
RecA_N
Lon_C
AAA_22
AAA_30
AAA
nSTAND_NTPase5
Glyco_hydro2_C5
AAA_5
nSTAND3
NACHT
AAA_14
AAA_29
NTPase_1
Rad51
AAA_24
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AOW23444
UniProt:
A0A175Y633
LinkDB
All DBs
Position
1560004..1561377
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AA seq
457 aa
AA seq
DB search
MAKPQKRYVCQACGSVSHRWAGQCGDCAEWNTLVEEAGAVVTPFQAKHNLHTGGRTVQLV
GLDAEIALPERMATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKFALAGRS
VAYVSGEEAADQVRLRARRLGLGSAPVQLAAATSVRDILTTLSIGAPPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGSIAGPRVLEHMVDTVLSF
EGERSHQYRILRSIKNRFGGTDEIGVFSMQSEGLAEVANPSALFLTQRDEGVSGTTVFPA
LEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFATAEVYLNI
AGGYRVQDPAADMAVAAALVSALSERPVPVDAVAFGEVALSGELRPVAHGALRLKEAGKL
GFERAMVPIALAKDDSALRLTGFRTLGQFVDHMLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccgcagaaacgatatgtgtgccaggcgtgcggatcggtgtcgcatcgctgg
gcggggcagtgcggcgattgcgccgaatggaacacgctggtcgaagaggcgggtgcggtc
gttacgccgttccaggccaagcataatctgcacaccggcgggcggacggtgcagctggtc
gggctggatgccgagatcgcgctgcccgaacgaatggcgacgggaatcgccgagctcgac
cgggcgctgggtggcggcttcgtcgaagggtcggcgacgctgatcggtggcgatccgggg
atcggcaagtcgacattgctgctgcaggcggcggcgaagttcgcgctcgccgggcggtcg
gtcgcctatgtgtcgggcgaggaggctgcggatcaggtgcggctgcgcgcgcggcggctg
gggctgggaagcgcgccggtgcagctcgctgcggcgacatcggtgcgcgatatcctgacg
acactgtcgatcggcgcgccgccagcgttgctggtgatcgattcgatccagacgatgcac
agcgacctgatcgagggcgcgccgggcacggtgagccaggtgcgcgcatcagcgcaggaa
ctgatccgcttcgccaaggaacgcgggaccgcgctggtgctcgtcggccacgtgaccaag
gacgggtcgatcgcggggccgcgcgtgctggaacatatggtcgacacggtgctgagcttc
gagggcgagcgcagccatcagtatcgcatcctgcggtcgatcaagaaccgcttcggtgga
acggacgagatcggcgtgttctcgatgcagagcgaagggctggccgaagtcgccaatccg
tcggcgctgttcctgacgcagcgtgacgagggagtgagcgggacgaccgtgttcccggcg
ctggaggggacgcggccggtgctggtcgagatccaggcgctggtcgtgcgcctcgccagc
ggcgcgacgccgcggcgtgcggtggtcggctgggacagcgggcggctggctatgatcctg
gcggtgctggaggcgcggtgtgggctgagctttgcgacggcggaagtctatctgaacatt
gcgggcggctatcgcgtgcaggacccggcggcggacatggcggtcgcggcggcgctggta
tcggcgctgtcggaacggccagtgccggtcgatgcggtggcgttcggtgaggtcgcgctg
tcgggcgagctgcggccggtggcgcatggcgcgctgcggctgaaggaggcggggaagctc
ggctttgaacgcgcgatggtgccgatcgcgctggccaaggacgacagcgcgctgcggctg
acggggttccggacgctggggcagttcgtggatcatatgctggggcgggggtga
DBGET
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