Sphingomonas melonis: BJP26_07655
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Entry
BJP26_07655 CDS
T04509
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_07655
Enzymes [BR:
smy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP26_07655
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BJP26_07655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AOW23465
UniProt:
A0A175Y5B6
LinkDB
All DBs
Position
1587118..1590540
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AA seq
1140 aa
AA seq
DB search
MAGTELATLPRLKGAQAAASDPHAHVWLSASAGTGKTQVLAARVFRLLLRGTDPSAILCL
TFTKAGAAEMAQRINNRLAAWVRMPAPQLYADLEALGEKGTPDLQARARTLFAGVLDAPG
GGLRIQTIHGFCQSLLAAFPVEAGLTPGFRPLEAREEAVLARETLATLLTDAEREGRERP
IETIGALSLRLGEGGAESFLLACARSLHALEALPIGIGPWLRRALDLPQGDIGEALAEGC
DCIDTDLVERLAAANTAWGAATGVGHAYTLHRWLAAAPAERAATLGDLAGVVLTGKNEPR
KASKKLIDAEPDYAELAVALGQHCLDLLSLTARAAYADLLADALEVGRDYARAYAAAKRR
TGAVDFDDLIGVTVRLLEQPGIGEWVRYKLDQGTEHVLIDEAQDTNLNQWRIVTALAGEF
FVGRGVHAPSTRTLFTVGDFKQAIFGFQGTDPINFRWAEGHFAGRAAEVEGADDWPEEER
GLPFQRLSLTHSFRSTRPILEFVDAAVAAAGEPGLGAIDAMQAHASEVPGPGTVELWPPV
IAGGSETDEEAWIDDAVRAQAVRIARAVRDWLNGGLMLESKGRALRPEDVMILVKRRGDL
ASLIVARLYAEGVPVAGVDRLRLNAPLAVQDLLAAVRFVLQPEDDLSLAALLVSPLIGWT
QDELMHAAPREHGSLWRHLTQTLSEERLAPLRAMLSRADIATPYQFLEEILSGPLDGRRR
LLRRLGAEARDPIEELLNAALAFETTSTPSLQRFLDWFDRGDVEIVRDPSAPLDAVRVMT
AHGAKGLQAPLVILADATVDPTAAPRALVRWVPEPGAQPIPIFRPRSGERGGPLDVAIGE
VERRELEEHWRLFYVAATRAEERLVIGGALGPRAQGEPPVASWYAAAARALTELGVPDEG
PRVFSGSDPQPPVKPRGAAPARSPERVVLPDWAHVPAPPESRPSRPLTPSALGEDEVSDP
PPGPAMRAAAERGRLFHALFERLPPVEPQHRAGCADRWLATAGGVADAAERQRIVAGVLA
VIENPAYAPLFGPDSLAEAPIAATLANGMVVSGTVDRLLIAPDAIRLVDFKTGRRVPDTL
DDIPPYHLDQMAAYVAALRVIFPDRTIEAALLYTGGPRLFELPADTLAAHKPRFRLPEQS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggccgggactgagctggcgaccctgccgcgattgaagggcgcgcaggcggcggcgagc
gatccgcacgcgcacgtctggctgtccgcatcggccggcaccggcaagacgcaggtgctc
gccgcgcgcgtgttccgcctgctgctgcggggcaccgatccatcggcgatcctatgcctg
accttcaccaaggcgggcgcggccgagatggcgcagcggatcaacaaccggctcgccgcc
tgggtgcggatgccggcaccgcaattgtacgccgatctggaagcgctgggcgagaagggt
acgccggatttgcaggcgcgggcccgcacgctgtttgcgggcgtgctcgacgcgccgggt
ggcggcctgcgcattcagacgatccatgggttctgccagagcctgctcgccgcatttccg
gtcgaggcggggctgacccccggcttccgcccgctggaggcgcgcgaggaggcggtgctg
gcgcgcgagacgctggcgaccctgctgaccgatgccgagcgcgagggccgcgaacggccg
atcgagacgatcggcgcgctgtcgctgcgactgggtgagggcggggcggagagtttcctg
ctcgcctgcgcacgctcgctgcacgcgctggaggcgctgccgattgggatcgggccgtgg
ttgcggcgcgcgctcgacctgccgcagggggatatcggcgaggccttggccgagggctgc
gactgtatcgacaccgatctggtcgagcggctggcagcggcgaacaccgcctggggtgcg
gcgacgggggtggggcatgcctacacgctccaccgctggctcgcggcggcaccggcggag
cgggccgcgacgctcggcgaccttgccggcgtggtgctgacggggaagaacgaaccgcgc
aaggcgtcgaagaagctgatcgatgccgaacccgattatgccgagctggccgtcgcgctg
gggcagcattgcctcgacctgctgtcgctcaccgcgcgcgccgcttatgccgatctgctg
gccgacgcgctggaggtgggccgcgactatgcacgcgcctatgccgcggccaagcggcgg
accggggcggtcgatttcgacgatctgatcggcgtgacggtgcggctgctcgaacaaccg
ggcatcggcgaatgggtgcgctacaagctcgaccagggcaccgagcatgtgctgatcgac
gaggcgcaggacaccaacctcaaccagtggcggatcgtgaccgcgctggcaggcgagttt
ttcgtcggccgcggtgtgcatgcgccctcgacccggacgctgttcacggtcggcgatttc
aaacaggcgatcttcggcttccagggcaccgacccgatcaacttccgctgggcagagggg
catttcgccggtcgtgcggcagaggtggagggggcggacgactggccggaggaggaacgc
ggcctgccgttccagcgcctgtcgctgacgcattcgttccggtcgacacggccgatcctg
gagttcgtcgatgccgccgtcgccgccgcgggggagccgggcctcggcgcgatcgacgcg
atgcaggcgcatgccagcgaggtgcccggccccggcacggtcgaactgtggccgccagtg
atcgcgggcggcagcgaaacggacgaggaagcgtggatcgacgatgccgtccgcgcacag
gcggtgcggatcgcacgcgcggtgcgcgactggctgaacggcggcctgatgctggagagc
aaggggcgggcgctcaggcccgaggacgtgatgatcctcgtcaagcggcgtggcgacctc
gcctcgctgatcgtcgcgcgcctgtatgccgagggtgtgccggtcgccggcgtcgaccgg
ttgcggctgaacgcgccgctggcggtgcaggatttgctcgctgcggtgcgcttcgtgttg
cagccggaggacgacctgtcgctcgccgcgctgctcgtgtcgccgctgatcggctggacg
caggacgagctgatgcatgccgcgccgcgagagcatggcagcctgtggcggcacctgacg
cagacgctgtcggaggaacgcctggcgccactgcgcgcgatgctgtcgcgcgccgatatc
gcgacgccctaccagttcctcgaagagatcctgtcggggccgctcgacggccggcggagg
ctgctgcgccggctgggggcggaagcgcgcgatccgatcgaggaactgctcaacgccgcg
ctggcgttcgagacgacgtcgacgccatcgctgcaacgcttcctcgactggttcgaccgc
ggggatgtcgagatcgtgcgcgatccgtcggcgccgctcgacgccgtgcgcgtgatgacc
gcgcatggcgcgaagggcttgcaggcgccgctggtgatcctggcggacgcgaccgtcgat
cccaccgccgcgccgcgtgcgctggtgcgctgggtgccggaaccgggggcgcagcctatc
ccgatcttccggccccggtcgggcgagcgtggcgggccgctggatgtagcgatcggcgag
gtcgagcgccgtgagctggaggagcattggcggctgttctatgtcgccgcgacgcgggcc
gaggaacggctggtgattggcggcgcgctggggccacgtgcgcagggcgagccgccggtc
gcgagctggtatgccgcggcggcacgcgcgctgaccgagctgggcgtgccggacgagggg
ccgcgcgtgttcagtggctccgatccccagccgccggtcaagccgcgcggcgctgcgccg
gcacgctcgcccgaacgggtcgtgctgcccgattgggcgcatgtgcccgcgccgcccgag
agccgtccgtcgcgcccgctgaccccgtccgccctcggtgaggatgaggtgagcgacccg
ccgcccggccccgcgatgcgcgccgccgccgaacgcgggcggctgtttcacgcgctgttc
gaacgcctgccgccggtcgagccacaacatcgcgccggctgcgcggatcgttggctcgcc
accgcgggtggtgtcgccgacgcggccgagcggcagcggatcgtcgcgggcgtgctcgcg
gtgatcgagaaccccgcctatgcgccgctgttcggccccgacagccttgccgaggcgccg
atcgccgcgacgctcgccaacggcatggtcgtgtcgggcaccgtcgaccggctgctgatc
gcgccggacgcgattcgcctcgtcgatttcaagaccgggcgccgcgtgccggataccctc
gacgatatcccgccctatcacctcgatcagatggcggcctatgtcgcggcgctgcgcgtg
atcttccccgatcgcacgatcgaggcggcgctgctctacaccggcgggccgcgtctgttc
gaactgcccgcagacacgctcgccgcgcacaagccgcgctttcgccttccggagcaaagc
tag
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