Sphingomonas melonis: BJP26_12420
Help
Entry
BJP26_12420 CDS
T04509
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smy01002
]
BJP26_12420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smy01011
]
BJP26_12420
Peptidases and inhibitors [BR:
smy01002
]
Cysteine peptidases
Family C82
BJP26_12420
Peptidoglycan biosynthesis and degradation proteins [BR:
smy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BJP26_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOW24279
UniProt:
A0A175Y6R7
LinkDB
All DBs
Position
complement(2615876..2617303)
Genome browser
AA seq
475 aa
AA seq
DB search
MAATILSALPAAAQVAPPTVQPTIQQVPVPASAAAPVVLPQISEAQATQLAALLPADTIA
QGLSLNPRPEDPAAREQLVRDALDHARAVHSGRLAEEDFQRDWGLRPPAYDPLPGFAEAV
RTDRIAAWIASLPPPYAGYDGLKAGLVRYRAIAAAGGWPTLAAGPDLTLGSSGARVLALR
QRLAVEDKDVATSGTTFDAALLEAVRRAQRRYGLNPTGTVAGQTLAALNVPAIARVRQIM
ANMERWRWLPQELPKDRVQVNIAAAVMTVFDGDAPVLSMRAVTGRPGDETPMLSSMIHSV
VINPPWNVPTSIATKELWPKEKKSPGYLKRNGFKVIDGTRLQQQAGDQSALGRFKFDFDN
NFSVYLHDTPSRAKFASFSRLASHGCVRLEKPEQLADLLLKGDPTWTPEAIAAQVQKGET
VRARLPKPVAVYLLYWTAFASGNGQMNFRDDPYGWDAALAAKIEARSARAVLASR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccatcctgtctgcactgcccgcggcggcgcaggtggcgcccccgaccgta
cagccgacgatccagcaggtgccggtgcccgccagtgcggctgcgccggtggtgctgccg
cagatcagcgaggcgcaggcgacgcagctggcggcgttgctgcccgccgacacgatcgcc
cagggactgagcctgaacccgcgtcctgaggacccggcggcgcgcgagcaattggtacgc
gacgcgctggaccatgcgcgcgcggtgcattcggggcggctcgccgaagaggatttccaa
cgcgactggggcctgcggccgccggcctatgacccgctgccgggattcgccgaagccgtc
cgcaccgaccggatcgcggcgtggatcgcatcgctgccaccaccttatgccggctacgac
gggctgaaggcgggcttggtccgctatcgtgccattgccgcggcgggcggctggccgacg
ctggcggcgggccccgacctgacgctggggtcgagcggcgcgcgcgtacttgcgctgcgc
cagcgcctggcggtcgaggacaaggacgtcgcgaccagcggcaccaccttcgacgctgcg
ttgctggaggcggtgcgtcgggcgcagcgccgctatggcctcaatcccaccggcaccgtc
gccgggcagacgctggcggcgctcaacgtgccggccatcgcgcgcgtgcgccagatcatg
gcgaatatggagcgctggcgctggttgccgcaggagctgcccaaggatcgcgtgcaggtg
aatatcgccgcggcggtgatgacggtgttcgacggcgatgcacccgtgttgtcgatgcgc
gcggtgacggggcggccgggcgacgagacgccgatgctgtcgtcgatgatccacagcgtg
gtcatcaatccgccgtggaacgtgccgacgtcgatcgcgaccaaggagctgtggccgaag
gaaaagaagagccccggttatctgaagcgcaacggcttcaaggtgatcgacggcacccgg
ctgcagcagcaggcgggcgaccagagcgcgctgggccggttcaagttcgacttcgacaac
aatttctcggtctatctgcacgacacgccgtcgcgcgcgaagttcgcgagcttcagccgg
ctcgcgagccatggctgcgtgcggctggaaaagccggagcagctggccgacctgttgctg
aagggcgatccgacctggacgcccgaggcgatcgccgcgcaggtgcagaagggcgagacg
gtccgcgcgcggttgcccaagccggtggccgtatacctgctctattggactgcctttgcc
agcggtaacgggcagatgaacttccgggacgatccctatggctgggatgcggcactcgcc
gcgaagatcgaggcgcgctcggcgcgcgccgttctggccagccgctga
DBGET
integrated database retrieval system