Sphingomonas melonis: BJP26_13575
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Entry
BJP26_13575 CDS
T04509
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BJP26_13575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_13575
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BJP26_13575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AOW24480
UniProt:
A0A175Y154
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All DBs
Position
2905867..2906742
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AA seq
291 aa
AA seq
DB search
MPARAYWQGQIRLALVSIPVEIYSATKSGASVAFKQIHEPSGKPIHYEKVVTGVGPVDTD
EIMKGYEVSKGEFVLLEQDEIDAVKLESKKTLELTQFVDADEIPVLYYEKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQSYFR
EIPDAKPDSELLDLAEALIDKKSGAFDPQEFHDRYVDALKDLIARKRKTKGKVIEDVDDD
TPAKSSNVVDLMAALKKSMEKSGGSAAKAAPAKKPAAKKAPAKRAPAKKRA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcgcctattggcaaggacagatccggctcgcgctggtgtcgataccggtc
gaaatctattcggcgacaaaaagcggtgccagcgtcgccttcaagcagatccacgaaccc
agcggcaagccgatccattacgagaaggtcgtcaccggcgtcggccccgtggacaccgac
gagatcatgaagggctatgaggtgtcgaagggcgaattcgtgctgctggagcaggacgag
atcgacgcagtaaagctcgaatcgaagaagacgctggagctgacccagttcgtcgatgcc
gacgaaattcccgtcctctattacgaaaaaccctatttcgtcgtgcctgcggacgatctg
gccgaagaggcgttcatcgtgctgcgcgaggcgctgcggcggacgaaaaaggtgggcctc
ggccaactggcgatgcgcgggcgcgaatatgtcgtcagcctgaagccgtgcggccgcggc
atggtgctggaaacgctgcgctacgccgatgaggtgaacaaggcacagagctatttccgc
gagatccccgacgccaagcccgacagcgaattgctcgaccttgccgaagcgttgatcgac
aagaagagcggcgccttcgatccgcaggaatttcacgaccgctacgtcgatgcgctgaag
gatctgatcgcgcgcaagcgcaagaccaagggcaaggtgatcgaggatgtcgacgacgac
acacccgccaagagcagcaatgtcgtcgatctgatggcggcgctaaagaagtcgatggag
aaatcgggcgggtcggcagccaaagccgcgccggcgaaaaagcccgccgcgaagaaggcc
cccgccaaacgcgccccggcgaagaagcgtgcctga
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