Sphingomonas melonis: BJP26_15055
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Entry
BJP26_15055 CDS
T04509
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smy03032
]
BJP26_15055
03036 Chromosome and associated proteins [BR:
smy03036
]
BJP26_15055
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_15055
DNA replication proteins [BR:
smy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BJP26_15055
Chromosome and associated proteins [BR:
smy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BJP26_15055
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BJP26_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AOW24723
UniProt:
A0A175Y556
LinkDB
All DBs
Position
3249112..3249393
Genome browser
AA seq
93 aa
AA seq
DB search
MTTTSDLAEQLSNTHGLAKADARKVIDAILANITAAVATGEEVSLNGFGKFKLKDTPERQ
GRNPSTGEAITIAASRKLTFAPAKAVRDRMNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacatccgatctggccgaacagctctccaatacccatggcctcgcaaaggcg
gacgccaggaaggtcatcgatgcgatccttgcgaacatcaccgcggctgtcgcgaccggc
gaggaagtcagcctcaacgggttcggcaagttcaagctgaaggacaccccagagcgccag
gggcgcaacccgtcgacgggcgaggcgatcacgatcgcggcgtcacgcaagctgacgttc
gcgccggcgaaggcggtccgcgatcggatgaacggcaagtga
DBGET
integrated database retrieval system
