Sphingomonas melonis: BJP26_17235
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Entry
BJP26_17235 CDS
T04509
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smy
Sphingomonas melonis
Pathway
smy00300
Lysine biosynthesis
smy00470
D-Amino acid metabolism
smy01100
Metabolic pathways
smy01110
Biosynthesis of secondary metabolites
smy01120
Microbial metabolism in diverse environments
smy01230
Biosynthesis of amino acids
Module
smy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJP26_17235
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJP26_17235
Enzymes [BR:
smy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BJP26_17235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AOW25072
UniProt:
A0A175Y2Y2
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All DBs
Position
3719870..3721084
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AA seq
404 aa
AA seq
DB search
MKPMGALPPEFAGQRGRLTIAGRPADDWAEATPVFVYDVGIVAARVARFRAAFPDVDLHY
AIKANPLPALLDRVAPLVDGLDVASGGELDKALAVKPASAISFAGPGKRDVELRAAIRAG
ATLNVESEGEATRALGLGEDLGIAPRLAVRVNPDIELRGSGMRMGGRPSPFGVDAARAAA
LVRAIVANGADWRGFHIYAGSQALDAGAIAETQAATLALAARLADEAGMAPPLVNLGGGF
GVPYFAGDVPLDVEAVGAALGEALAARPAVLGQTRFAIELGRWLVAEAGVYLTRIVDRKE
SQGETFLVTDGGLNHQLAASGNFGTVVRRNYPLALARDVGRAGDETVSVVGPLCTPLDRL
GDRITLPYADAGDLIAIFMAGAYGASASPSGFLGHPPAVEIVAG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgggggcgctgccgcccgaattcgccgggcagcgcggcaggttgacgatc
gcagggcggcctgcggacgactgggcggaggcgacgcccgtcttcgtctatgacgtcggc
atcgtcgcagcgcgggtggcgcggttccgggcggccttccccgacgtggatctgcattat
gcgatcaaagccaaccccttgcccgcgctgctcgaccgggtcgcgcccctggtcgacggg
ctggacgtcgcgtcggggggcgagctggacaaggccttggcggtcaagcccgcgtcggcg
atcagcttcgcggggccgggtaagcgcgatgtcgagctgcgcgcggcgatccgggcaggc
gcgacgctcaacgtcgaatcggaaggcgaggcgacgcgggcgctggggctgggcgaagac
ctcggcatcgcgccgcggctggcggtgcgggtgaatcccgacatcgaattgcgcggttcg
ggcatgcggatgggcgggcgaccgtcgcctttcggcgtcgatgcggcgcgcgcggcggca
ctggtccgcgcgatcgtcgcgaacggggcggactggcggggctttcacatctatgccggc
agtcaggcgctggatgccggcgcgatcgccgagacgcaggccgcgacgctggcgctcgct
gcgcgactcgccgacgaggcggggatggcgccgccgctggtcaatctgggcggcgggttc
ggcgtgccctatttcgccggcgacgtgccgctggatgtcgaggcggtgggcgcggcgcta
ggcgaggcactggcggcgcggcccgccgttctcggccagacccgctttgcgatcgagctg
gggcgctggctggtggcggaggcgggcgtctatctgacgcggatcgtcgatcgcaaggag
agccagggcgagacgttcctcgtcaccgatggcggcctcaatcaccagctcgccgcgtcg
ggcaatttcggcacggtggtacggcgcaactatccgctggcgctggcgcgcgacgtgggc
cgcgcgggtgacgagacggtgtcggtggtggggccactgtgtacgccgctcgaccggctg
ggcgaccggatcacgttgccgtatgccgacgcgggcgacctgatcgcgatcttcatggcg
ggggcctatggtgccagcgccagtccgtccggctttctggggcatccgcccgcggtggag
atcgtcgcgggttag
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