Sphingomonas melonis: BJP26_17990
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Entry
BJP26_17990 CDS
T04509
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smy03032
]
BJP26_17990
03036 Chromosome and associated proteins [BR:
smy03036
]
BJP26_17990
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_17990
DNA replication proteins [BR:
smy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BJP26_17990
Chromosome and associated proteins [BR:
smy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BJP26_17990
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BJP26_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AOW25203
UniProt:
A0A175Y351
LinkDB
All DBs
Position
complement(3868188..3868514)
Genome browser
AA seq
108 aa
AA seq
DB search
MIFINLRNLAPGGARTVIRSELVQKLCDLNPELTSHDVEAIVSTFFDEITLRLAANGRVE
LRGFGAFSTRARDARVGRNPRTGETVDVDAKRVPYFKPGKEMRARLNV
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
ttgatcttcatcaatctccgcaacctggcgccggggggagcccgtaccgtgatccgatct
gaactcgttcaaaaactctgcgatctcaaccccgagctgacgagccacgacgtcgaggcg
atcgtgagcactttcttcgatgagatcacgctgcgtcttgccgcgaacggccgcgtcgaa
ctgcgcggcttcggcgccttttcgacccgcgcccgcgatgcccgcgtcggtcgcaacccg
cgcaccggcgaaaccgtcgatgtcgacgccaagcgcgtcccctatttcaagcccggcaag
gaaatgcgcgcccgtctgaacgtgtga
DBGET
integrated database retrieval system
