Sphingomonas melonis: BJP26_18780
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Entry
BJP26_18780 CDS
T04509
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smy
Sphingomonas melonis
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BJP26_18780
Enzymes [BR:
smy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BJP26_18780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
SdrD_B
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
AOW25335
LinkDB
All DBs
Position
complement(4043235..4044134)
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AA seq
299 aa
AA seq
DB search
MGPAHFNILNTYALVFTDGSPPAPIDTSWYGNMGLQGWVPLSQRGGLTGSGITGLDPNYR
YTVALSNANAQYYTTADASGAFACTGILPGTYTLQVFKNELSVASQSVTVSAGISTPVGP
ISASDPSAQAAVWRIGDWDGSPQELLNGDKVTTMHPSDVRMASWTPGAFTVGTSTARQFP
AYSWKDVNGVQTVNFQLAANQVADSKVRIGITTAYAGGRPVIRVNNWSSATTAASTQPSS
RTLTIGSYRGNNTLYTFDVPASALVAGSNTLAISIVSGSGGSQWLSPGVSYDAIDFLQS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtggggcctgctcacttcaacattctcaacacctatgcattggtcttcaccgatggcagc
ccgccggcgccgatcgacacgtcctggtatgggaacatgggcctgcaagggtgggtccct
ctctcgcagagaggtggactgaccggcagcggcattaccgggctcgatccgaattaccgt
tacaccgtggccctgtcgaatgcgaacgcgcaatattacacgaccgccgatgcgtcaggg
gctttcgcctgcaccggcattctgcccgggacctacacgctccaggtcttcaagaacgaa
ctatccgttgccagccagtccgttaccgtcagcgccggcatatcgacgcccgtcggcccg
atcagcgcgtccgatccctcggcgcaggccgccgtatggaggatcggcgattgggacggg
tcgccgcaagaattgctgaacggcgacaaggtcaccacgatgcacccctcggacgttcga
atggcgagttggacgccaggcgccttcaccgtcggcacctccacggctcgccagttcccg
gcctacagctggaaggacgtgaacggcgtgcagaccgtcaatttccagctggccgcgaac
caggtcgctgactccaaggtgcgcatcggcatcacgaccgcctatgcgggcggtcgtccg
gtcatccgcgtcaacaactggtcgtcggccactaccgcggcatcgacgcagccatcgtcg
cgcacactgaccatcgggtcataccgcggtaataatacgctctataccttcgacgttccg
gcaagcgctctcgtggcgggcagtaacacgctggccatcagcatcgtcagcggatcgggc
ggatcgcagtggctcagtcccggcgtttcctacgatgcgattgactttctccagtcctaa
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