Sphingomonas melonis: BJP26_18900
Help
Entry
BJP26_18900 CDS
T04509
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smy
Sphingomonas melonis
Pathway
smy03420
Nucleotide excision repair
smy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP26_18900
03430 Mismatch repair
BJP26_18900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smy03400
]
BJP26_18900
Enzymes [BR:
smy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP26_18900
DNA repair and recombination proteins [BR:
smy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP26_18900
MMR (mismatch excision repair)
Other MMR factors
BJP26_18900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
DUF6034
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AOW25354
UniProt:
A0A175XZK5
LinkDB
All DBs
Position
complement(4068870..4071155)
Genome browser
AA seq
761 aa
AA seq
DB search
MTDTASPAALQDPPYLKGLNPPQRDAVLTTEGPVLMLAGAGTGKTAALTARLAHLLWTRK
AWPSEILAVTFTNKAAREMRERVGRMVGDAVEGMPWLGTFHAIGAKMLRRHAELVGLQSN
FTILDTDDQLRLLKQLIVAADIDEKRFPARSLAGLIDDWKNRGLVPADIDAGESERYANG
RGGELYTQYQARLRNVNACDFGDLLLHMLTILKTHADVLRTYQERFKYIMVDEYQDTNIV
QYLWLRLLAQTRKNIACVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPH
ILGAASGVIAHNGGRLGKTLWTELDVGEKVRVLGVWDGPEEARRVSDEIEAAQRNGTPLD
HIAILVRAQHQTREFEDRFISIGMPYRIVGGYRFYERAEIRDALAYLRIVNQPSDDLAFE
RIVNVPKRGLGDKAIAKIHQLARAEGVPLTIAAARILDTDELTPQARRALGNFVGDVARW
RDRARDLPHAELARQMLDESGYTAMWQAEKSVEASGRLENLSELIRAMEEYESLGAFLEH
VSLVMDKDGAVQAPEVTIMTIHAAKGLEFDTVFLVGWEEGLFPSQRAIDEGGTRSLEEER
RLAYVAITRARRRATILHAANRRIYGQWTSSIPSRFVGELPPEHTDSDTTMSGGESLWRA
NWSERADPFANVARGTGRGPGWQRAAGSGSGFTTQPTRIVESRASAVSIGNKGRSDLSVG
MRVFHQKFGYGAIAEIEGNKLEIDFEAAGRKRVMDSFVTIG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccgcctcccccgccgccctgcaggatccgccgtatctcaaggggttgaac
ccgccgcagcgcgacgcggtgctcaccaccgaaggcccggtgctgatgctggccggcgca
ggcacgggcaagaccgcggcgctgaccgcgcggctcgcgcatttgctgtggacgcgcaag
gcgtggccgtcggagattctcgccgtcaccttcaccaacaaggccgcgcgcgagatgcgc
gagcgcgtcggccggatggtcggcgacgcggtggagggcatgccgtggctcggcaccttc
cacgcgatcggcgccaagatgctccgccgccatgccgagctggtcggattgcagtcgaac
ttcaccatcctcgacaccgacgatcagttgcggctgctcaagcagttgatcgtcgccgcg
gacatcgacgaaaagcgcttccccgcgcgcagcctcgccggcctgatcgacgattggaag
aacaggggtctggtccccgccgatatcgatgccggcgagagcgagcgctacgccaacgga
cgcggcggcgagctgtatacgcaatatcaggcgcggctgcgcaacgtgaacgcctgcgac
ttcggcgacctgctgctccacatgctcaccatcctgaagacgcatgccgatgtgctgcgg
acgtatcaggaacgcttcaaatacatcatggtggacgaatatcaggacaccaacatcgtc
cagtatctgtggctgcggctgctcgcccagacacgcaagaacatcgcctgcgtcggcgac
gatgatcagtccatctattcgtggcgcggcgcacaggtcgaaaacatcctgaagttcgag
aaggattttcccggcgccaaggtgatccgcctcgaacagaattaccggtcgacgccccac
atcctcggcgccgcatcgggcgtgatcgcgcataacggcggtcggctcggcaagacgctg
tggaccgaactcgacgtaggcgaaaaggtgcgcgtgctgggggtgtgggacgggcccgaa
gaagcccgccgggtcagcgacgagatcgaggccgcgcagcggaacggcaccccgctcgac
catatcgcgatcctcgtccgcgcgcagcatcagacgcgcgagttcgaagaccgcttcatc
tcgatcggcatgccgtaccgcatcgtcggcggctatcgcttctacgaacgcgccgaaatc
cgcgacgcgctcgcctatctgcgcatcgtcaaccagccgtcggacgatctggccttcgaa
cgcatcgtcaacgtccccaaacgcggccttggcgacaaggcgatcgccaagatccaccag
ctcgcccgcgccgagggcgtaccgctcaccatcgccgcggcgcgcattctcgacaccgac
gaactgaccccgcaggcgcgccgcgcgctcggcaatttcgtcggcgacgtcgcccgctgg
cgcgaccgggcgcgcgacctgccgcatgccgagctggcgcggcagatgctcgacgaatcg
ggctataccgcgatgtggcaggccgaaaagtcggtcgaggcatccgggcggctcgaaaac
ctgtccgaactcatccgcgcgatggaggagtacgaatccctcggcgcattcctcgagcac
gtcagcctcgtcatggacaaggacggcgcggtgcaggcgcccgaggtgacgatcatgacg
atccacgccgccaagggcctcgaattcgacaccgtcttcctggtcggttgggaagagggc
ctgttcccctcgcaacgtgcgatcgacgaaggcggcacgcgcagcctggaggaggagcgc
cgcctcgcctatgtcgcgattacgcgtgcgcgccgccgcgcgacgatcctccacgccgcc
aaccgccgcatctacggccagtggacctccagcattcccagccgcttcgtcggcgagttg
ccgcccgaacataccgacagcgacaccaccatgtcgggtggcgaaagcctgtggcgtgcc
aattggagcgagcgcgccgatcccttcgccaatgtcgcacgcggcaccggccgcggtccg
ggctggcagcgcgcggcggggtccggctccggcttcaccacccagccgacgcggatcgtc
gagagccgggcgagcgcggtcagcatcggcaacaaggggcgcagcgacctcagcgtcggc
atgcgcgtcttccaccagaagttcggctatggcgcgatcgccgagatcgaaggcaacaag
ctggagatcgacttcgaagccgccggccgcaagcgggtgatggacagcttcgtcacgatc
gggtga
DBGET
integrated database retrieval system
