Stenotrophomonas maltophilia D457: SMD_0003
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Entry
SMD_0003 CDS
T02061
Symbol
recF
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMD_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_0003 (recF)
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SMD_0003 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_29
AAA_16
ABC_tran
Glyco_hydro_39
Zeta_toxin
AAA_22
AAA_25
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CCH10606
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All DBs
Position
3700..4794
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AA seq
364 aa
AA seq
DB search
MLIRRLALHQLRRFNAVELSPQPGLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDGL
VRQGQEALEIFVEWDEQRANHPPHRRKAGLRHSGQDWKGRLDGEDVAQLGNLCAALAVVT
FEPGSHALVSGGGEPRRRFLDWGLFHVEPDFLSLWRRYSRALKQRNALLKQGGPSRMLDT
WDHELAEAGEPLTSRRQHYLERLQQRTVALASSLAPQLGIQALELSPGWRRHELPLADAL
LLARERDRQAGYTSVGPHRADWSVDFHSIPGRDALSRGQAKLTALACLLAQAEDYAEQRG
EWPVIALDDLGSELDRTHQARVLQRLLGGPAQIFITATETPAALQELTHIARFHVEHAQI
VAVP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcttatccgccgcctcgccctgcaccaactgcgtcgcttcaatgcggtggagctgtcg
ccccagccgggattgaacctgctgaccggcgacaacggtgccggcaagaccagcgtgctc
gaggccctgcacctgatggcctatgggcgcagcttccgtggtcgtgtccgcgatggattg
gtgcgccagggccaggaagcgctggaaatcttcgtggaatgggacgaacaacgtgccaat
cacccgccgcaccgccgaaaggccggcctgcggcacagtggtcaggattggaaggggcgc
ctggacggcgaagacgtggcccagctcggcaatctgtgcgcagcgcttgcggtagtcaca
ttcgagccaggcagccatgcgttggtcagcggtggtggtgaaccccgccgccgattcctc
gattggggcttgttccacgtggaacctgatttcctgtccctgtggcgccggtattcgcgg
gcactgaaacagcgcaatgccctgctcaagcaaggtggcccgtcgcggatgctggatacc
tgggatcacgaactggctgaagccggcgaaccgttgaccagccgtcggcagcactacctg
gagcgtctgcagcagcgcaccgtggcgctggcttccagcctggccccgcagctcggcatc
caggcactggaactcagcccgggctggcgtcggcacgagctccctctggccgatgcgctg
cttctggcccgggaacgtgaccgccaggccggatacacctcggtcggtccgcaccgggca
gactggagcgtggatttccacagcattccgggtcgcgatgcgctgtcccgcggccaggcc
aagctgacggcattggcctgcctgctggcgcaggccgaggactacgcggaacagcgcggc
gaatggccggtgatcgcattggacgatctgggctcggagctggatcgcacccaccaggcg
cgggttctgcagcgcctgctcggtgggccggcgcagatcttcatcaccgccaccgaaacg
ccggcggcgctgcaggaactgacccacatcgcccggttccacgtggaacatgcacagatc
gtggctgtgccatag
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