Stenotrophomonas maltophilia D457: SMD_1289
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Entry
SMD_1289 CDS
T02061
Name
(GenBank) DNA methylation and regulatory protein Ada or
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD_1289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smz03000
]
SMD_1289
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_1289
Enzymes [BR:
smz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SMD_1289
Transcription factors [BR:
smz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SMD_1289
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMD_1289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
CobS_N
Motif
Other DBs
NCBI-ProteinID:
CCH11852
LinkDB
All DBs
Position
complement(1436630..1438108)
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AA seq
492 aa
AA seq
DB search
MDTALALDTAACDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKPRNITYYPTAAA
AAAAGYRPCLRCRPELAPQAQQALAGQTVQRALALIHGGFLQEQPVADLATKLGLSARQL
QRLFVERLGATPGQIHATHRLLLAKQLLTETTLAVTDVALAAGYNSLRRFNTAFLQGCGM
APTALRRQHQPLAADDGGLVLRLGYRPPLDFPRMLAFLRKRSLPGIELIGEDSYQRVLGT
PERPTLLRVTADPKRPELRLQLGAVDPRLIPDIVRRVRRVFDLDADLQQVHAALGEEPLL
ARGIAERPGLRVPGGWDGFEVGVRAVLGQQVTVAAATTFARRLVDAYGAHLPGMSSDFDR
QFPAPEVLAEAPLESIGLPRSRAATVRALATACASGQLDFGPGQALEEFVARCVALPGIG
PWTAQYIALRGLGQPDAFPAGDLVLQQVLGHAQGQRLSERATEARSQPWRPWRAYAVLHL
WHLSGTFVGEPT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccctcgccctcgacaccgccgcctgcgatcgcgcccgcctggcccgcgac
gcacgtttcgacggcgtgttcttcaccgccgtgcgcagcaccggcatctattgccgcccg
gtctgccccgcaccgcccccgaagccgcgcaacatcacctactacccgaccgccgctgct
gccgccgccgccggctatcgcccgtgcctgcgctgccgcccggagctggcaccacaggcc
cagcaggcactggccgggcagaccgtacagcgcgccctggccctgatccacggcggcttc
ctgcaggagcagccggtggccgatcttgctacgaagctcggcctcagcgcgcgccagctg
cagcgcctgttcgtcgaacgcctgggcgcgacgcccgggcagatccacgccacccatcgc
ctgctgctggccaagcaactgctgaccgagaccacgctggcggtgaccgacgtcgcactg
gccgccggatacaacagcctgcgccgcttcaataccgcattcctgcagggctgcggcatg
gcccccaccgcactgcgccgccagcatcaaccgctggccgccgacgatggcggcctggtg
ctgcgcctgggctaccgtccaccgctggacttcccgcgcatgctggcgttcctgcgcaag
cgcagcctgcccggcatcgaactgattggcgaggacagctaccagcgcgtgctgggcacg
ccggagcgccccaccctgctgcgcgtcactgccgacccgaagcgcccggagctgcgcctg
cagctgggtgcggtggatccgcgcctgatcccggacatcgtgcgccgcgtgcgtcgcgtg
tttgatctggatgccgacctgcagcaggtgcacgccgcattgggtgaggaacccttgctg
gcgcgcggcatcgccgagcgcccggggctgcgcgtgcccggcggctgggatggcttcgaa
gtgggcgtgcgcgccgtgctcggccagcaggttactgttgccgccgccaccaccttcgcg
cggcggctggtcgatgcctatggcgcgcacctgccgggcatgtcgtccgactttgatcgc
cagttcccggcacccgaggtattggccgaggcgcctctggaatcaatcggcctgccgcgc
agccgcgccgcgaccgtgcgtgcactggccaccgcctgcgccagcggccagctcgacttc
gggcccggccaggcgctggaagagtttgttgcccgctgcgtggcactgcccggcatcggc
ccatggaccgcgcagtacatcgctttgcgtggcctcggccagcccgatgccttcccggcc
ggcgatcttgtactgcagcaggtcctcggccacgcgcagggccagcgcctgagcgaacgc
gcaaccgaagcgcgctcgcaaccgtggcgtccctggcgcgcctacgccgtgctgcacctg
tggcacctgtccggcacattcgttggagaaccgacatga
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