Stenotrophomonas maltophilia D457: SMD_1823
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Entry
SMD_1823 CDS
T02061
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
smz
Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smz03009
]
SMD_1823 (dbpA)
Enzymes [BR:
smz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SMD_1823 (dbpA)
Ribosome biogenesis [BR:
smz03009
]
Prokaryotic type
rRNA helicases
SMD_1823 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
CCH12368
LinkDB
All DBs
Position
complement(2011595..2012971)
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AA seq
458 aa
AA seq
DB search
MTDFSTLPLSPALQPGLDALGYTTLTPVQAQSLPAILDGRDVIAQAPTGSGKTAAFGLGL
LQAIDPSLIRVQALVLCPTRELADQVGKQIRKLATGIPNLKLLLLVGGVPLGPQLASLEG
HDPHVVVGTPGRVQELARKRALNLGAVRTLVLDEADRMLDMGFEEPIREIAGRTHRDRQS
LLFSATFPDSIRAMARDLLRDAVEVTVEGADQAPAIRHLFCEVEPAHRQKALAGLLLKYT
PESAVVFCNTRKDVDEVANSLQQFGFSALALHGDMEQRDREEVLLLLANRSCNVLVASDV
AARGLDVEELAAVINYELPTDVESYQHRVGRTGRAGASGLAISLVAGREKTRADAIEAQM
GQPLDWQKTPLATSRPAELPQAAMRTLRIDGGKTDKLRPGDILGALTGDAGLSSKFIGKI
AIFPTRSYVAIAREQANKAVAKLEAGKIKGRRFRVRMM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttctcgaccctgccgctgagcccggccctgcagcccggcctggatgccctc
ggctacaccaccctcacccccgtgcaggcgcagagcctgccggccatcctcgatggccgt
gatgtgatcgcacaggcacccaccggcagcggcaagaccgccgccttcggcctgggcctg
ctgcaggccatcgaccccagcctgatccgcgtgcaggcgctggtgctgtgcccgacccgc
gaactggccgaccaggtcggcaagcagatccgcaagctggccaccggcatccccaacctg
aagctgttgctgctggtgggcggcgtgccgctgggcccgcagctggcctcgcttgaaggc
cacgatccgcatgtggtggtcggcacgcccggccgcgtgcaggagctggcacgcaagcgc
gcgctgaacctgggcgcggtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaggagccgatccgcgagatcgccggccgcacccatagggaccgccagagc
ctgctgttctccgccaccttccccgacagcatccgcgccatggcgcgtgacctgctgcgc
gacgcggtggaagtgaccgtggaaggcgccgaccaggcaccggccatccgccacctgttc
tgcgaggtggaaccggcgcatcgccagaaggcgctggccggcctgctgctgaagtacacg
ccggaatcggcggtcgtgttctgcaacacccgcaaggatgttgacgaagtggccaactcg
ctgcagcagttcggcttctccgcactggccctgcatggcgacatggaacagcgcgaccgc
gaggaagtgctgttgctgctggccaaccgcagctgcaacgtgctggtcgccagcgacgtc
gccgcgcgcggcctggacgtggaagagctggcggcggtgatcaactacgaactgccgacc
gacgtggagagctaccagcaccgcgtgggccgtaccgggcgcgccggtgccagcggcctg
gcgatcagcctggtggccggccgcgagaagacccgcgccgacgccatcgaagcgcagatg
gggcagccgctggactggcagaagacgccgctggcaacctcgcgcccggccgaactgccg
caggccgcgatgcgcacgctgcgcatcgacggtggcaagaccgacaagctgcgcccgggc
gacattctcggtgcgctgaccggtgatgccggcctgtcgagcaagttcatcggcaagatc
gcgatcttcccgacccgctcctatgtggcgatcgcgcgtgagcaggccaacaaggccgtg
gccaagctggaagccggcaagatcaagggccgtcgtttccgcgtgcggatgatgtga
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