Stenotrophomonas maltophilia D457: SMD_2017
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Entry
SMD_2017 CDS
T02061
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz00061
Fatty acid biosynthesis
smz00071
Fatty acid degradation
smz01100
Metabolic pathways
smz01212
Fatty acid metabolism
smz02024
Quorum sensing
smz04146
Peroxisome
Module
smz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SMD_2017 (fadD)
00071 Fatty acid degradation
SMD_2017 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SMD_2017 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMD_2017 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smz01004
]
SMD_2017 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smz04147
]
SMD_2017 (fadD)
Enzymes [BR:
smz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SMD_2017 (fadD)
Lipid biosynthesis proteins [BR:
smz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SMD_2017 (fadD)
Exosome [BR:
smz04147
]
Exosomal proteins
Exosomal proteins of breast milk
SMD_2017 (fadD)
Exosomal proteins of breast cancer cells
SMD_2017 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CCH12560
LinkDB
All DBs
Position
complement(2236498..2238174)
Genome browser
AA seq
558 aa
AA seq
DB search
MSLDRPWLQSYPKGVPAEIDVNEFHSVASVFDASVAKFRDRPAYSSFGKVLTYGETDALV
EQFAAYLLGELKLKKGDRVALMMPNCLQYPVATFGVLRAGLTVVNVNPLYTARELKHQLV
DAGVTALVVVDNFGDTVEQVIADTPVKHVVTTGLGDLLGAKGVIVNFVLKYIKKMVPNYH
LKGAVRFRQALKLGSRHSLPKVEIDHDDIAFLQYTGGTTGVAKGAMLTNRNLIANMQQAS
AWISASGIEMGKEWIITALPLYHIFALTANGLVFMKFGGCNHLITNPRDMKGFVKELKSV
RFTAITGVNTLFNGLLNTPGFDTVDFSSLKVTLGGGMAVQRAVAERWKKVTGVTLVEAYG
LTETSPAACINPLTLTEYNGSIGLPIPSTDACIKDDNSAILPLGEVGELCIKGPQVMKGY
WQRPEETAKAIDADGWLHTGDMAKMDEHGFFYIVDRKKDMILVSGFNVYPNEVEDVIAMM
PGVLEVAAVGVPDDKSGEVVKVVIVKKDPNLTAEMVKEHARANLTGYKHPKIVEFRKELP
KTNVGKILRRELRDTPAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgtccctggctgcagagctatccgaaaggcgttcccgccgagatcgac
gtcaacgagttccattcggtagcttcggtcttcgacgcttccgtcgcgaaattccgcgac
cgtcccgcctactccagcttcggcaaggtcctcacctacggcgagaccgacgcgctggtc
gaacagttcgcggcctacctgctcggtgagctcaagctcaagaagggtgaccgcgtcgcc
ctgatgatgcccaactgcctgcagtacccggtggccaccttcggcgtgctgcgcgccggc
ctgaccgtggtcaacgtcaacccgctgtacaccgcccgcgagctcaagcaccagctggtc
gatgccggcgtgaccgcgctggtggtggtcgacaacttcggcgacaccgtcgagcaggtc
atcgccgatacgccggtcaagcatgtggtcaccaccggcctgggcgacctgctcggcgcc
aagggcgtgatcgtcaacttcgtgctgaagtacatcaagaagatggtgcccaactaccat
ctcaagggcgcggtgcgcttccgccaggcgctcaagctcggcagccgccacagcctgccc
aaggtcgagatcgaccacgacgacatcgcgttcctgcagtacaccggcggcaccaccggc
gtggccaagggcgcgatgctgaccaaccgcaacctgatcgccaacatgcagcaggcctcg
gcctggatcagtgcgtccggcatcgagatgggcaaggagtggatcatcaccgccctgccg
ctgtaccacatcttcgcgctgaccgcgaacgggctggtcttcatgaagttcggtgggtgc
aaccatctgatcaccaacccgcgcgacatgaagggcttcgtcaaggagctcaagtcggtg
cgtttcaccgccatcaccggcgtcaacacgctgttcaacggcctgctcaacacccccggt
ttcgacacggtcgacttctcctcgctgaaggtcaccctcggcggcggcatggcggtgcag
cgcgccgtcgccgagcgctggaagaaggtcaccggcgtgaccctggtcgaggcctatggc
ctgaccgagacttcgccggcagcctgcatcaacccgcttaccctgaccgagtacaacggc
tcgatcggcctgccgatcccctccaccgatgcctgcatcaaggatgacaacagtgccatc
ctgccgctgggcgaggtcggcgagctctgcatcaagggcccgcaggtgatgaagggctac
tggcagcgcccggaggaaacggccaaggccatcgacgcggacggctggctgcataccggc
gacatggccaagatggacgaacacggcttcttctacatcgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaacgtgtacccgaacgaagtcgaggacgtgatcgcgatgatg
ccgggcgtgctggaagtggccgcggtcggcgtcccggacgacaagtccggcgaggtggtg
aaggtggtcatcgtgaagaaggacccgaacctgaccgccgaaatggtcaaggagcatgcc
cgggccaacctgaccggctacaagcaccccaaaatcgttgaattccgaaaggagctgccg
aagaccaacgtcggcaagatcctccgtcgcgaactccgcgatacgcccgcccagtaa
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