KEGG   Stenotrophomonas maltophilia D457: SMD_2487
Entry
SMD_2487          CDS       T02061                                 
Symbol
nrdE
Name
(GenBank) Ribonucleotide reductase of class Ia (aerobic),alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
smz  Stenotrophomonas maltophilia D457
Pathway
smz00230  Purine metabolism
smz00240  Pyrimidine metabolism
smz01100  Metabolic pathways
smz01232  Nucleotide metabolism
Module
smz_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
smz_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:smz00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SMD_2487 (nrdE)
   00240 Pyrimidine metabolism
    SMD_2487 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smz03400]
    SMD_2487 (nrdE)
Enzymes [BR:smz01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SMD_2487 (nrdE)
DNA repair and recombination proteins [BR:smz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SMD_2487 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone DUF5805
Other DBs
NCBI-ProteinID: CCH13026
LinkDB
Position
complement(2769055..2771418)
AA seq 787 aa
MTDSTFRVADLAGAGDALRAGGERVPTWITKEAGNRRLPFDAERLQRSIDAVHAEFPQLD
VSDYRRVVQAMVERKSSISADDLVDLLIREAESRVDLVAPEWEQFAARIYLRRLYKRASR
NRFYDVGLKYGSYVGLQESLADRGIYSNDILRCYSKEELQQAGGMIDPERDRLFAYNGLY
LLATRYLASDRSREVYELPQERWLTIALYLMQEEKPRERRMQLVGEAYWALSNLYMTVAT
PTLANAGKVGGQLSSCFIDTVDDSLQGIYDSNTDIARVSKHGGGVGAYLGYVRSSGAPIR
GVPNSSGGVVPWIKQLNNTAVSVDQLGQRKGAVAVYLDIWHRDIEAFMDLRLNNGDQRLR
AHDVFTSVCVPDLFMEAVERRADWYLFDPHEVKQAKGWYLQDFYDEKRGAGSFRDRYAEL
VADERISRRTVKAIDLFKRIMLSQLETGNPFLFYRDEVNRRNPNKHAGMIYSSNLCTEIL
QNMSPTRMIQEIVSGDQIVTTRRAGDFVVCNLSSINLGRAIHAPDDLLATDVLERLIPIQ
VRMLDNVIDLNALPVPQATITNRKYRAIGLGTFGWHHLLAQQAIQWDSPDAEQLADRLYE
RINFLTIQASAQLAKEKGSYPMFTGSDWHNGRYFRDRDYTGAAWDSLAREVATHGLRNGW
LLAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDFRRPVAAPGLSLETWPYYEKGAYKVD
QFASVRQNARRQRHVDQSISFNLYVPSTIRASTLLELHLSAWREGLKTTYYVRSNDIDIS
ECEWCAS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgaccgacagtaccttccgcgtggccgatctggccggcgctggcgacgccttgcgcgcc
ggtggcgagcgcgtgccgacctggatcaccaaggaggccggcaaccgccgcctgccattc
gacgccgagcgcctgcagcgcagcatcgatgcggtgcacgccgagttcccgcagctggac
gtgagcgactaccgccgcgtggtgcaggcaatggtcgagcgcaagtccagcatcagtgcc
gatgacctggtcgatctgctgatccgcgaggccgagtcgcgcgtggacctggtcgcgccg
gagtgggagcagtttgccgcgcgcatctacctgcgccgcctgtacaagcgtgccagccgc
aaccgcttctacgatgtcggcctgaagtacggctcctacgtgggcctgcaggaaagcctg
gctgaccgcggcatctacagcaacgacatcctgcgctgctactcgaaggaagaactgcag
caggccggcgggatgatcgacccggaacgcgaccgcctgttcgcctacaacggcctgtac
ctgctggccacgcgctatctggccagcgaccgcagccgcgaggtctatgagctgccgcag
gagcgttggctgaccatcgcgctgtacctcatgcaggaagaaaagccgcgcgagcggcgc
atgcagctggtcggcgaggcgtactgggcgctgtccaacctgtacatgacggtggccacg
ccgaccctggccaacgccggcaaggtcggggggcaactgtccagctgcttcatcgacacg
gtggacgacagcctgcagggcatctatgactccaataccgacatcgcccgcgtgtccaag
cacggcggcggcgtgggtgcctatctgggctatgtgcgcagcagcggcgcgccgatacgg
ggcgtgcccaattcctccggcggcgtggtgccgtggatcaagcagctcaacaacaccgca
gtgtcggtcgaccagcttggccagcgcaagggcgcggtggcggtgtacctggacatctgg
caccgcgacatcgaagccttcatggacctgcgcctcaacaacggcgaccagcgcctgcgc
gcgcatgatgtgttcacctcggtgtgcgtgccggacctgttcatggaagcagtcgaacgc
cgtgccgactggtacctgttcgacccgcacgaggtgaagcaggccaagggctggtacctg
caggacttctacgacgagaagcgcggcgcgggcagcttccgcgaccgctacgccgaactg
gtggccgacgagcgcatcagccggcgcacggtgaaggcgatcgatctgttcaagcgcatc
atgctcagccagctggagaccggcaacccgttcctgttctaccgcgacgaggtcaaccgc
cgtaacccgaacaagcacgccggcatgatctattccagcaacctgtgcaccgagatcctg
cagaacatgagcccgacgcggatgatccaggagatcgtcagcggcgaccagatcgtcacc
acacgccgcgccggcgacttcgtggtctgcaacctgtcttcgatcaacctcggccgcgcg
atccatgcgccggatgacctgctggccaccgatgtgctggagcgcctgatcccgatccag
gtgcgcatgctggacaacgtgatcgacctcaacgcactgccggtgccgcaggccacgatc
accaaccgcaagtaccgcgccatcggactgggcacgttcggttggcaccacctgctggcg
cagcaggcgatccagtgggattcaccggatgccgaacaactggccgaccgcctgtatgag
cgcatcaatttcctgaccatccaggccagcgcgcaactggcgaaggaaaagggcagctat
ccgatgttcaccggcagcgattggcacaacgggcgttacttccgtgatcgcgactacact
ggcgccgcatgggacagcctggcccgcgaggtcgccacgcacggcctgcgcaacggctgg
ctgctggcggtcgcgccgaacatgagcaccgcgcagattgccggctccaccgcgtcgatc
gacccgatctacagcgcgttctactacgaggaaaaaaaggacttccggcggccggtggcg
gcgccgggcctgtcgctggaaacctggccgtactacgagaagggggcctacaaggtcgac
cagttcgccagcgtgcgccagaacgcgcgtcgccagcgccatgttgatcagtcgatcagc
ttcaacctgtacgtgcccagcacgatccgcgccagcaccctgctggagctgcacctgagc
gcctggcgtgaaggcctgaagaccacgtactacgtgcgctccaacgacatcgacatcagc
gaatgcgagtggtgcgccagctga

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