KEGG   Stenotrophomonas maltophilia D457: SMD_3112
Entry
SMD_3112          CDS       T02061                                 
Name
(GenBank) Helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
smz  Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:smz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smz03400]
    SMD_3112
Enzymes [BR:smz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SMD_3112
    5.6.2.6  RNA 3'-5' helicase
     SMD_3112
DNA repair and recombination proteins [BR:smz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SMD_3112
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: CCH13633
LinkDB
Position
3455290..3457749
AA seq 819 aa
MNRSQALRRLEDWFASKGWRSLPFQRAMWRHYLAGGSGLLHTPTGSGKTLAMFGGPLLQA
MIDPPPSPRRAGAVRPLQVLWVTPLRALASDTARALQAVVDGLQLGWRVGLRSGDASNRE
RRQAREGRIDVLVTTPESLALLLSYPDTLPRMRQLRCVVVDEWHELLGNKRGVLLQLNLA
VLRDAAPALQLWGLSATLGNLDEARDVLLPGQPDAPIVQGVRPRATTVRSLLPEPGERFP
WAGHLGLAQLPRVLDALMQARSSLLFTNTRAQAELWHQALASVWPEEHDTLALHHGSLDP
ALRQQVEDGLRAGTLRCVVATSSLDLGVDFPEVEQVLQLGSPKGVARLRQRAGRARHRPG
ASGAILCVPSHALELAEYAAVRRALAEGVVEARRPPMLSLDVLAQHAVSRALAGGFHGDA
LLAQVRRTHAFASLAEDQWQAVLTFIVQGGQALAQYPDFHKVVQDADGRYRMHDRRQALR
HRLSIGTISSDGSVRVQFLRGAGLGAVEEQFASRLRRGDRFQFAGRLLELVQLRDMTAFV
RLARGRGEGVVPRWQGGQLPLSMALGSELESVLSGADDSAEARWLAPLLALQQQVSALPG
PDHVLLEDVRRREGQFLFVYPFAGRHVHEALAALLALRCTRQQRNSIGYAVNDHGLVLAP
AQAIDLDAAQWHALFTTDQLLDDLRAAVNLGELARRQFRGIARVAGLLVPSLPGGMPRSL
RQLQASAGLLYDVLREHDPEHLLLALAEREVLHDSLDLPGLRQVLVRIGARRMSMQRPPS
LTPLGFPLWAERLRGQFSNEDWRTRVQRAAQQLERRHGR
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaaccgcagccaggcactacgccggctggaagactggttcgcgtcgaaaggctggcgc
tcgttgccgttccagcgcgcgatgtggcggcactatctcgccggcggatccgggttgctg
cacacgcccacaggcagcggcaagacactggcgatgttcgggggaccgctgctgcaggcc
atgatcgacccaccgccttcgccccgccgcgccggtgcggtacgcccgctgcaggtgctg
tgggtgacgcccttgcgcgcgttggccagcgacaccgcgcgtgcgctgcaggccgtggtc
gatgggttgcagcttggatggcgtgtcggcctgcgcagcggtgacgccagcaaccgcgaa
cgacgacaggcacgcgagggccgcatcgacgtactggtcacgacgccggaatcgctggcg
ctgctgttgagctatccggatacgctgccgcgcatgcgccagctgcgctgcgtggtggtg
gacgaatggcacgaactgctgggcaacaagcgcggtgtcctgctgcagttgaatctggcc
gtgctgcgcgatgccgcgccggcattgcagctgtgggggctgtcggccacgctgggcaat
ctggatgaggcgcgcgacgtgctgctgcccggacagcccgacgcgccgatcgtgcagggc
gtgcgcccgcgtgcgaccacggtgcgcagcctgctgcccgaacccggtgaacgctttccc
tgggccgggcacctgggcctggcccaactgccgcgggtgctggacgcattgatgcaggca
cgcagcagcctgctcttcaccaacacccgtgcacaggcagaactgtggcatcaggcgctg
gcgtcggtttggcccgaggaacacgacacgctcgcgctgcaccacggttcgctggatccg
gcgctgcgccagcaggtggaggacgggctgcgtgcaggaacgctgcgctgcgtggtcgcc
acctccagcctcgacctcggcgtggactttcccgaggtcgaacaggtactgcagctgggc
agcccgaagggcgtcgcccgcctgcgccagcgcgccggacgtgcgcgccatcgtcccggt
gccagtggcgcgatcctctgcgtgccgagccatgcgctggaactggccgagtacgcagcc
gtgcgtcgcgcactggccgaaggcgtggtcgaagcacgcaggccaccgatgctgtcgctg
gacgttctggcccagcatgcggtcagccgtgccctggccggtggcttccacggtgatgcg
ctgctggcgcaggtccggcgcacccatgcgttcgcatccctggccgaggaccagtggcag
gccgtgctgactttcatcgtgcaggggggccaggccctggcccagtaccctgacttccac
aaggtcgtgcaggacgccgatggccgctaccggatgcacgaccggcgccaggcactacgc
caccggctgtcgatcggcaccatcagcagcgatggcagcgtgcgcgtgcagttcctgcgc
ggggccggcctcggcgccgtggaggaacagttcgccagccgcctgcgccgcggagaccgc
ttccagttcgccgggcgcctgctggagctggtgcagctgcgcgacatgaccgccttcgtg
cggctggcacgagggcgcggtgaaggtgtcgtgccccgctggcagggaggccagctgccg
ctgtcgatggcactcggcagcgaactggagtcggtgctgtcaggcgccgacgacagtgcg
gaagcgcgctggctggcaccgctgctggcacttcagcagcaggtgtcggcgcttcccggc
ccggaccacgtgctgctggaagacgtacgccgccgcgaaggccagttcctcttcgtctat
cccttcgccggacgccacgtgcacgaggcgctggccgccctgttggcactgcgctgcacc
cgccagcaacgcaacagcatcggctatgccgtgaatgatcacggcctggtgctggcaccg
gcgcaggcgatcgacctggacgcggcgcaatggcatgcgttgttcaccaccgatcagctg
ctggacgatctgcgtgcggcggtgaacctgggcgagcttgcgcggcgccagttccgtggc
atcgcgcgcgtcgcaggcctgctggtacccagcctgccggggggcatgccgcgatcgctg
cgccaactgcaggcctcggcgggcctgctgtacgacgtgttgcgcgagcatgaccccgag
cacctgctgctggcgctcgccgaacgcgaagtgctgcatgacagcctcgacctgccgggg
ctgcgccaggtgctggtccggatcggcgcgcgacgcatgtcgatgcagcgccctccatcg
ctgacgcccctgggctttccactgtgggccgaacgcctgcgcgggcagttcagcaacgag
gactggcgtacccgcgtgcaacgcgcggcccagcagctggaacgtcgccatggccgatga

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