KEGG   Stenotrophomonas maltophilia D457: SMD_3245
Entry
SMD_3245          CDS       T02061                                 
Symbol
yoaA
Name
(GenBank) DinG family ATP-dependent helicase YoaA
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
smz  Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:smz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smz03400]
    SMD_3245 (yoaA)
Enzymes [BR:smz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SMD_3245 (yoaA)
DNA repair and recombination proteins [BR:smz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SMD_3245 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2
Other DBs
NCBI-ProteinID: CCH13764
LinkDB
Position
complement(3611098..3613146)
AA seq 682 aa
MSDLVHASREALSEGGALASHLDAFVPRPAQLHLTDAIAEALQQRDLLLAEAGTGTGKTF
AYLVPVLLSGLRTIISTGTRALQDQLYHRDLPRVRQALGVGLRSALLKGRANYLCRYRLQ
QARGEPRFSSPEQAAQFQRILAWSGRSEFGDIAELEGLADDSPLLPMVTSTVDNCLGTDC
PFWDDCFVVRARQRAQAADVVVVNHHLLLADLALKQDGFGELLPGAQAFVIDEAHQLPEL
AAQFFGEGFGMRPWQELGRDCLAEARGVGGAQSALQEPVDQLQQALLALRSAMEGLPPRG
TQWRALAMPQVRDGFDTVMAGLVTLEQALQPLREAAAGLDACHARAREAVSRLQRWLGDD
EPTLDFDTDPAETPRAADVLWYELTPRGFRCQRTPMDVSGPLREHRERSRAAWIFTSATL
TVGGGFDHIATRLGLDDPHTLVQPSPFNWPEQALCYLPEGLPDPAARGFGTALIQTLRPV
LQASQGRAFLLFASHRALREAAEALRDGPWPLFVQGEAPRAALLQRFRESGNGVLLGSAS
FREGVDVVGEALSVVMIDKLPFAAPDDPVYEARLEAIRSQGGNPFRDEQLPQAVIALKQG
VGRLIRSESDRGVLVLCDPRLLNRGYGRVFLESLPPFRRTRSLADVQAFFRPQWLPVADD
AAAPAAVAAGPEPAPGATFPLF
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgtccgaccttgtccatgccagccgcgaagccctcagcgaaggcggcgcgctcgcctcg
catctggatgcctttgtcccgcgtccggcacagctgcacctgaccgacgccatcgccgaa
gcgctgcagcagcgcgacctgctgctggccgaggccggtacaggcaccggcaagaccttc
gcctatctggtgccggtgctgctgtccgggctgcgcaccatcatctccaccggtacccgc
gcgttgcaggaccagctctaccaccgcgatctgccgcgcgtgcgccaggcactgggcgtt
ggcctgcgcagcgcgctgctgaaggggcgcgcgaattacctgtgccgctaccgcctgcag
caggcgcggggcgaaccgcgtttttccagcccggagcaggctgcgcagttccagcgcatc
ctggcctggtccggccgttcggagttcggtgacatcgccgaactggaaggcttggccgat
gactcgccgcttctgccgatggtcacttccacggtcgacaactgcctgggtaccgattgc
ccgttctgggacgactgcttcgtggtgcgcgcgcgccaacgtgcgcaggctgccgacgtg
gtggtggtcaaccaccacctgctgctggccgacctggcactgaaacaggacggcttcggt
gagttgctgccgggggcgcaggcctttgtcatcgacgaggcgcatcagctgcccgagttg
gccgcgcagtttttcggcgaaggcttcggcatgcgcccgtggcaggaactcggccgcgac
tgcctggccgaggcgcgcggcgtaggcggcgcgcagtcggccctgcaggaaccggtcgac
cagttgcagcaggcgttgctggcgctgcgctcggcgatggaggggctgccgccacggggt
acgcagtggcgtgcgctggcgatgccacaggtgcgcgatggattcgatacggtgatggcc
ggcctggtgacgctggagcaggcactgcaaccgctgcgcgaggcggcggcgggtctggat
gcctgtcatgcgcgggcacgcgaggcggtgtcgcggctgcagcgctggctgggcgatgat
gagcccaccctcgatttcgataccgatccggcggagaccccccgtgccgccgatgtgctc
tggtatgagctcaccccgcgtggtttccgctgccagcgcacgccgatggatgtgtccggc
ccgctgcgcgagcatcgcgagcgcagccgcgcggcatggatcttcacctcggccacgctg
accgtgggcggtggcttcgaccacatcgccacgcgcctgggcctggacgatccgcacacg
ctggtccagccgagcccgttcaactggcccgagcaggcgttgtgctacctgcccgaaggc
ctgcccgatccggcggcgcgcgggtttggcaccgcgctgatccagaccttgcggccggtg
ttgcaggcctcgcagggcagggcgttcctgttgttcgcctcgcaccgtgcattgcgcgag
gccgccgaggcactgcgcgacgggccgtggccgttgttcgtgcagggcgaggcgccacgc
gcggcgctgctgcagcgtttccgcgaatcgggcaatggcgtgctgctgggctcggccagt
ttccgcgagggcgtggacgtggtcggcgaagcgctgagcgtggtgatgatcgacaagctg
ccgttcgcggcaccggatgacccggtatacgaggcgcggctggaggcgatccgcagccag
gggggcaacccgttccgcgacgagcagctgccgcaggcggtgatcgccctgaagcagggc
gttggccgcctgatccgcagcgaaagcgaccggggcgtgctggtcctgtgcgatccgcgc
ctgctcaaccgtggctatggccgggtctttcttgagtcgctgccgccgttccggcgcacc
cgcagcctggccgatgtgcaggccttctttaggccacaatggctgcccgtggccgatgat
gcggctgccccggccgccgttgcggcgggcccggagcctgctcccggtgccacgttcccc
ttgttctga

DBGET integrated database retrieval system