Stenotrophomonas maltophilia D457: SMD_3708
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Entry
SMD_3708 CDS
T02061
Symbol
lpdA
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz00010
Glycolysis / Gluconeogenesis
smz00020
Citrate cycle (TCA cycle)
smz00260
Glycine, serine and threonine metabolism
smz00280
Valine, leucine and isoleucine degradation
smz00310
Lysine degradation
smz00380
Tryptophan metabolism
smz00620
Pyruvate metabolism
smz00630
Glyoxylate and dicarboxylate metabolism
smz00640
Propanoate metabolism
smz00670
One carbon pool by folate
smz00785
Lipoic acid metabolism
smz01100
Metabolic pathways
smz01110
Biosynthesis of secondary metabolites
smz01120
Microbial metabolism in diverse environments
smz01200
Carbon metabolism
smz01210
2-Oxocarboxylic acid metabolism
smz01240
Biosynthesis of cofactors
Module
smz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
smz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
smz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SMD_3708 (lpdA)
00020 Citrate cycle (TCA cycle)
SMD_3708 (lpdA)
00620 Pyruvate metabolism
SMD_3708 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SMD_3708 (lpdA)
00640 Propanoate metabolism
SMD_3708 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMD_3708 (lpdA)
00280 Valine, leucine and isoleucine degradation
SMD_3708 (lpdA)
00310 Lysine degradation
SMD_3708 (lpdA)
00380 Tryptophan metabolism
SMD_3708 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SMD_3708 (lpdA)
00670 One carbon pool by folate
SMD_3708 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smz04147
]
SMD_3708 (lpdA)
Enzymes [BR:
smz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SMD_3708 (lpdA)
Exosome [BR:
smz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SMD_3708 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
NAD_binding_8
HI0933_like
FAD_binding_2
Thi4
AlaDh_PNT_C
GCV_H
FAD_binding_3
DUF478
3HCDH_N
RnfC_N
DAO
Amino_oxidase
SlpA_D2
Motif
Other DBs
NCBI-ProteinID:
CCH14221
LinkDB
All DBs
Position
complement(4148172..4149974)
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AA seq
600 aa
AA seq
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MATIEVKVPDIGDYSDVPVIEVLVAVGDTVKKDQGLVTLESDKATLEVPSSAAGVVKEIK
VKLGDTLSEGAVVVVLDAEGAAEAPAKAAAPAPAAPASKPPVTPSHRAPAEPAAPKPALS
SGKPADIECEMVVLGSGPGGYTAAFRAADVGLDTVLVERYASLGGVCLNVGCIPSKALLH
AAAVIDEVAHAGDFGVEFGKPTITLDKLRAYKEKVVNQLTKGLAGMAKQRKVRNVQGVGR
FVSANELEITAADGSTQLLRFQKCIIAAGSQAVKLPNFPWDDKRVMDSTDALELAEVPGS
LLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGIDVHLKT
KASGVTADAKGITVTFEAAEEGQAPALAQGTFDRVLVAVGRSPNGKKIDAEKAGVQVTDR
GFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGHKKEWVARVIPSVAY
TNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRIIGGA
IVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVAMASEIYDGTITDLYMPKKK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccacgattgaagtcaaggttcccgacatcggcgattacagcgatgtgccggtgatc
gaagtgttggtcgccgtcggcgacacggtgaagaaggaccagggtctggtaaccctggag
tcggacaaggccaccctggaagtgccgtcctcggccgccggcgtggtcaaggaaatcaag
gtcaagctgggcgataccctgtccgaaggcgccgtggtcgtggtgctggacgctgaaggc
gccgccgaagccccggccaaggccgccgcgccggctccggccgccccggccagcaagccg
ccggtgaccccgtcgcaccgcgccccggccgaaccggctgcgccgaagccggcgctgtcc
agtggcaagccggccgatatcgagtgcgaaatggtcgtgctgggctcgggcccgggcggc
tacacggctgcgttccgcgccgccgacgtcggcctggatacggtgctggtcgaacgttac
gccagcctcggcggcgtctgcctcaacgtgggctgcattccgtccaaggcgctgctgcac
gccgcagcggtcatcgacgaggttgcccacgccggtgatttcggcgtcgagttcggcaag
ccgaccatcaccctggacaagctgcgcgcgtacaaggaaaaggtcgtcaaccagctgacc
aagggcctggccggcatggccaagcagcgcaaggtccgcaacgtgcagggcgtcggcagg
tttgtttcggccaacgagctggaaatcaccgcggctgacggcagcacccagctgctgcgc
ttccagaagtgcatcatcgccgccggttcgcaggcggtgaagctgccgaacttcccgtgg
gacgacaagcgcgtgatggattccaccgatgcgctggagctggccgaagtgccgggctcg
ctgctggtcgtcggcggcggcatcatcggcctggaaatggccaccgtgtacagcgcgctg
ggcagcaaggtcaccgtggtcgagttcatggaccagctgatgccgggcgccgacaaggac
ctggtcaagccgctggccgaccgcctgaagaagcagggcatcgacgtgcacctgaagacc
aaggcctcgggcgtcaccgccgatgccaagggcatcaccgtgaccttcgaagccgccgag
gaaggccaggcgcctgcgctggcgcagggcaccttcgaccgcgtgctggtggccgtgggc
cgctcgccgaacggcaagaagatcgatgccgagaaggccggcgtgcaggtcaccgaccgc
ggcttcatcccggtcgatcggcagatgcgtaccaacgtgccgcacatctttgccatcggc
gacatcgtcggcaacccgatgctggcccacaaggccacgcacgagggcaagctggccgct
gaagtggcagccggccacaagaaggagtgggtcgcccgcgtgattccgtcggtggcctac
accaacccggaaatcgcctgggtcggcgtgaccgagaccgaagccaaggccaagggcctg
aaggtcggcgtggccaagttcccgtgggccgccagtggccgcgcgatcggcatcggtcgc
accgagggcttcaccaagctgatcttcgacgaagagacccaccgcatcatcggtggcgcg
atcgtcggcgtgcatgccggcgacctgctggccgagatcggcctggcgatcgagatgggg
gcggaagcggaagacatcggccacaccatccatgcgcatccgacgctgagcgagtcggtg
gcgatggcctcggaaatctacgacggcacgatcaccgatctgtacatgccgaagaagaag
taa
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