Stenotrophomonas maltophilia D457: SMD_4004
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Entry
SMD_4004 CDS
T02061
Symbol
agaR
Name
(GenBank) Transcriptional repressor of aga operon
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
smz
Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smz03000
]
SMD_4004 (agaR)
Transcription factors [BR:
smz03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SMD_4004 (agaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
DprA_WH
HTH_Mga
MarR
FaeA
HTH_5
MarR_2
HTH_24
RnfC_N
PaaX
FeoC
Motif
Other DBs
NCBI-ProteinID:
CCH14510
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All DBs
Position
4497813..4498589
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AA seq
258 aa
AA seq
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MRNTRSRRQQILQLLIEHGSVQVADLVERFGVSAVTIRADLTHFESQGLANRTHGGATLV
RTPPQEQDIHEKDALNLPLKESIGARAARLVQPGDNIIIDSGSTTMTLARHLRAHRDVTV
MTNGLNIAWELANAAGITVLLTGGLLRQQSLSLQGSQAEASLNSYSFDTLFLGVDGLDLQ
FGLTTHDEAEARLNHRMVERARRIVVLTDASKFGRVSLHRIALLDQIHAIITDAGIDDAT
REGLQRLGIEVIIAEPTA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacacccgctcccgccggcaacagatcctgcagctgctgatcgagcacggctcg
gtgcaggtggccgatctggtcgagcgcttcggcgtgtcggcggtgacgatccgtgccgac
ctgacccacttcgaatcgcagggcctggccaaccgcacccacggcggcgcgaccttggtg
cgcacgccgccgcaggaacaggacatccatgagaaggacgcgctgaacctgccactgaag
gaatcgatcggtgcgcgcgctgcgcgcctggtgcagccgggtgacaacatcatcatcgat
tccggctcgaccacgatgacgctggcgcgccacctgcgcgcgcatcgcgacgtgacggtg
atgaccaacggcctgaacatcgcctgggaactggccaatgccgcgggcatcaccgtgctg
ctgaccggtggcctgctgcgccagcagtcgctgtcgctgcagggcagccaggccgaagcc
agcctcaactcgtacagcttcgacaccctgttcctgggcgtggacggcctggacctgcag
ttcggcctgactacccacgacgaggccgaagcccgcctcaaccaccgcatggtcgagcgt
gcgcgccgcatcgtggtgctgaccgatgcctccaagttcggccgcgtcagcctgcaccgc
atcgccctgctggaccagatccacgccatcatcaccgacgccggcatcgacgatgcaacc
cgcgaagggctgcagcggctgggcatcgaagtgatcatcgccgagcccaccgcatga
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