Stackebrandtia nassauensis: Snas_0803
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Entry
Snas_0803 CDS
T01194
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
sna
Stackebrandtia nassauensis
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_r4
CCD
Motif
Other DBs
NCBI-ProteinID:
ADD40515
UniProt:
D3Q810
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Position
complement(851567..854062)
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AA seq
831 aa
AA seq
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MGSAQPPGEPRPSGDTGPVEQPSDAELIAATRSGDTTAYGQLYERHVHAARKLGRILARD
AAEADDLTSETFAKVLATLRAGRGPDLAFRAYLLTTLRNTFYDRTRRDKKVEFTDDMTRH
DPGEDFVDTAVAGQERRYAARAFHRLPERWQVVLWHTEVEGESAAEVAPLLGLSPNGVSA
LAYRARERLRQMYLQEHIADSPGATCRWTADRLGARVRGGLSNRDETKVDDHLEECTACK
LLFVELAEVNSGMRGVLAPVILGLAAPAYLGGTALKSAVLAGWFGGVGVWVKSTFGWIWR
PVNWARRGIQQMGGKGAAIAGGTAAVAGILALILVANNTTPPPEPPAQAQEPPVEDEQEQ
DEDEQDEPSDDAPDDQPSDEEKEKQKDEEDEPDPPARPTKFSVGTDLTSADLTAGGTGTL
PITVTAPKQTTESGSAGPTTGRLAAAGPTTENLVTGFNPRLLTEPEDVMTLTLSFGEGIS
SPGGDAGDGWSCQPGEGELTCVRAELKPGQSTTAQIPLDVAPEVTGFHDIDVSVVSDNLK
GTKTLRVPVAPVGMRTAYASHDATGVASAGNTLLTCVPKKHCRHAAADNHTSVMKSYAAE
DHPGGLDGGNAVSGARLNIPAGAKVLWAGLHWTASGHHAMPDVKISTPGGGWQNVGAQRQ
FSGIERPVKQSVADITGMVWGSGEYYVAADKHALPKGIFKYAGWSITAVYQLPGAGPRET
AVYEGLAQPRAEDTLSVSLPGAGESQLAYTVWDGDRTLAGDNFAINGTTVGDAGNFAHGV
SESALEGADWNTFGVDVGTAEASHGDDAHATIFTGSDPLEIGVLALSTPPP
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcccagccacccggcgagccccgcccctccggcgacacaggccccgtcgag
cagcccagcgacgccgagctcatcgccgccacccgaagcggcgacaccacggcgtacggg
cagctgtacgagcggcacgtccacgccgcccgcaaactgggccggatcctggcccgggac
gcggccgaagccgacgacctgacctcggagaccttcgccaaggtgctggcgaccctgcgg
gccgggcgcggcccggacctggccttccgcgcgtacctgctgacgacgctgcgcaacacc
ttctacgaccgcacccggcgcgacaagaaggtcgagttcaccgacgacatgacccggcac
gacccgggcgaggacttcgtcgacaccgccgtggccgggcaggaacgccgctacgcggcc
cgcgccttccaccggctgccggagcgctggcaggtggtgctgtggcacaccgaggtcgag
ggtgagtccgccgccgaggtggcgccgctgctgggcctgtcccccaacggggtctcggcc
ctggcctaccgcgcccgggagcggcttcggcagatgtacctgcaggagcacatcgccgac
tcgcccggcgcgacctgccgctggaccgccgaccggctcggcgcccgggtccggggcggg
ctgtcgaaccgcgacgagaccaaggtggacgaccaccttgaggagtgcaccgcctgcaag
ctgctgttcgtcgagctggccgaggtcaactcgggcatgcgcggggtgctggcaccggtc
atcctgggcctcgcggccccggcctacctgggcggcaccgccctcaaaagcgccgtgctt
gccggttggttcggcggcgtcggcgtgtgggtcaagagcaccttcggctggatctggcgt
ccggtcaactgggcgcggcgcggcatccagcagatgggcggcaagggcgccgcgatcgcc
ggtggcaccgccgccgtcgcgggaatcctggcgctgatcctggtcgccaacaacaccacg
ccgccgccggagccgcccgcgcaggcgcaggaaccgcccgtcgaggacgagcaggaacag
gacgaggacgagcaggacgaaccctccgacgacgcccccgacgaccagcccagcgacgag
gagaaggaaaagcagaaggacgaggaggacgagcccgacccgcccgcccgtccgacgaag
ttctccgtcggcaccgacctgaccagcgccgacctgaccgcgggcggcaccgggacgctg
ccgatcaccgtcaccgccccgaagcagaccaccgagtccggttcggccgggccgacgacc
ggcaggctcgccgccgccggacccacgaccgagaacctggtcaccgggttcaacccgcgg
ctgctcaccgaacccgaggacgtcatgacgctgacgctgtcgttcggcgagggcatctcc
tcccccggcggcgacgccggggacggctggagctgccagcccggcgagggcgagctgacc
tgtgtgcgcgccgaactcaagccgggccagtcgaccaccgcccagatcccgctggacgtc
gcccccgaggtgaccggcttccacgacatcgacgtgtcggtggtgtcggacaacctcaag
ggcaccaagacgctgcgggtgccggtggcgccggtcgggatgcgcaccgcctacgcctcc
cacgacgcgaccggggtcgcctcggccgggaacaccctgctgacctgcgtccccaagaag
cactgccgtcacgcggcggccgacaaccacacctcggtgatgaagagctacgccgccgag
gaccatccgggcgggctggacggcggcaacgcggtcagcggcgcccggctgaacatcccc
gccggcgccaaggtgctgtgggcggggctgcactggaccgcctcgggccaccacgccatg
cccgacgtcaagatctccaccccgggcggcggctggcagaacgtcggcgcgcaacgccag
ttctccggcatcgaacgcccggtcaagcagtcggtcgccgacatcaccggcatggtgtgg
ggctcgggcgagtactacgtcgccgccgacaaacacgccctgcccaagggcatcttcaag
tacgcgggctggagcatcaccgccgtctaccagctgccgggcgcgggcccgcgcgagacc
gccgtgtacgagggcctggcgcagccgcgcgccgaggacaccctgtcggtgtcgctgccg
ggcgcgggcgagagccagctggcctacacggtgtgggacggcgaccgcaccctcgccggc
gacaacttcgccatcaacggcaccaccgtcggcgacgccgggaacttcgcccacggcgtc
tcggagtcggcactggagggcgcggactggaacaccttcggggtcgatgtcggcaccgcc
gaggcatcgcacggcgacgacgcccacgcgaccatcttcaccggctccgatccgctggag
atcggggtgctggcgctgtcgacgccgccgccctga
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