Stackebrandtia nassauensis: Snas_1087
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Entry
Snas_1087 CDS
T01194
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Snas_1087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sna03019
]
Snas_1087
03110 Chaperones and folding catalysts [BR:
sna03110
]
Snas_1087
03029 Mitochondrial biogenesis [BR:
sna03029
]
Snas_1087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sna04147
]
Snas_1087
Enzymes [BR:
sna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Snas_1087
Messenger RNA biogenesis [BR:
sna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Snas_1087
Chaperones and folding catalysts [BR:
sna03110
]
Heat shock proteins
HSP60 / Chaperonin
Snas_1087
Mitochondrial biogenesis [BR:
sna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Snas_1087
Exosome [BR:
sna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Snas_1087
Exosomal proteins of other body fluids (saliva and urine)
Snas_1087
Exosomal proteins of breast cancer cells
Snas_1087
Exosomal proteins of colorectal cancer cells
Snas_1087
Exosomal proteins of bladder cancer cells
Snas_1087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADD40797
UniProt:
D3QA85
LinkDB
All DBs
Position
1154248..1155873
Genome browser
AA seq
541 aa
AA seq
DB search
MPKILKFSDDARQNLEHGVNHLADTVKVTLGPKGRNVVLDQSFGAPTITNDGVTIAKEIE
LDDPYANLGAQLVKEVATKTNDVAGDGTTTATVLAQSLVHGGLKNVASGASPIALKRGMD
AAAAAVNEALLARADQISSKEDIAKVATVSAQDAGIGDLLAEAFQSVGADGVITVEEGST
LATELDITEGMQFDKGYISPYFVTDHEEQEAVLEDALILITNSKIGSIEELLPVLEKVQP
TGKPLLIIAEDVEGQALATLVVNAARGTFRACAVKAPAFGDRRKAMLEDIAVLTGGQLVS
DEIGLKLDQVGVDQLGNARRVVVEKDTTTIVDGAGEKAAVDARVAQIKTQAEQTDSSWDR
EKLEERLAKLSGGVAVIRVGAATEVELKERKHRIEDAVSATRAALEEGVVPGGGTALVGV
REALDKLDVIGEEQVGVDLVRKSLASPLHCIAANAGVSGDVVVSKVEEAGWGHGYNAATG
TYGDLAADGIVDPVKVTRNAVNNAVSIAGLILTTDVLVVDKPEEPADDDSHGHSHGHSHP
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatcctcaagttttccgatgacgcccgccagaacctggagcacggtgtcaac
cacctggccgacaccgtcaaggtgaccctgggtcccaagggccgcaacgtggtcctcgac
cagtcgttcggcgcccccacgatcaccaacgacggcgtcaccatcgccaaggagatcgaa
ctcgacgacccgtacgccaacctcggcgcgcagctcgtcaaggaggtcgccaccaagacc
aacgacgtcgccggagacggcaccacgaccgccacggtcctggcgcagtcgctggtgcac
ggcggcctgaagaacgtggcctcgggcgccagcccgatcgcgctcaagcgcggcatggac
gccgcggccgccgccgtcaacgaggcgctgctggcccgcgccgaccagatctccagcaag
gaggacatcgccaaggtggcgacggtctccgcgcaggacgccgggatcggtgacctgctg
gccgaggccttccagtccgtgggcgccgacggcgtcatcacggtcgaggagggttcgacc
ctggcgaccgagctggacatcaccgaggggatgcagttcgacaagggctacatctcgccg
tacttcgtcaccgaccacgaggagcaggaggccgtcctcgaagacgccctcatcctcatc
accaactccaagatcggttcgatcgaggagctgctgccggtgctggagaaggtgcagccc
accggcaagccgctgctgatcatcgccgaggacgtcgagggccaggccctggcgaccctg
gtggtcaacgccgcgcgcggcaccttccgcgcctgcgcggtcaaggccccggccttcggc
gaccgccgcaaggccatgctcgaggacatcgcggtgctgaccggcggacagctggtcagt
gacgagatcggcctcaagctggaccaggtcggcgtcgaccagctgggcaacgcccggcgc
gtcgtcgtcgagaaggacaccaccaccatcgtggacggtgctggcgagaaggccgccgtc
gacgcccgggtcgcgcagatcaagacccaggccgagcagaccgactccagctgggaccgc
gagaagctggaggagcggctggccaagctgtccggcggcgtcgccgtcatccgggtcggc
gcggccaccgaggtcgaactcaaggagcgcaagcaccgcatcgaggacgccgtctcggcg
acccgcgcggcccttgaggaaggcgtcgtccccggcggcggcaccgccctggtgggtgtg
cgcgaggcgctggacaagctcgacgtgatcggtgaggagcaggtcggcgtcgacctggtc
cgcaagtcgctggcgtccccgctgcactgcatcgcggccaacgccggtgtctccggtgac
gtcgtggtgtccaaggtcgaggaggccggttggggtcacggctacaacgcggccaccggc
acctacggtgacctcgccgccgacggcatcgtcgacccggtcaaggtgacccgcaacgcc
gtcaacaacgcggtctcgatcgccggtctgatcctgaccaccgacgtgctggtcgtggac
aagccggaggagcccgccgacgacgacagtcacgggcacagccacggccacagccacccg
cactag
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integrated database retrieval system
