Stackebrandtia nassauensis: Snas_1219
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Entry
Snas_1219 CDS
T01194
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sna
Stackebrandtia nassauensis
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sna03016
]
Snas_1219
Enzymes [BR:
sna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Snas_1219
Transfer RNA biogenesis [BR:
sna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Snas_1219
Prokaryotic type
Snas_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADD40929
UniProt:
D3QBB2
LinkDB
All DBs
Position
1292435..1293337
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AA seq
300 aa
AA seq
DB search
MNDDVRGRPGDEPGASTDVSLVRLRLDICYDGTDFAGWAFQPGQRTVAGEVFTALSALFG
QPEGLTVAGRTDAGVHATGQVAHVDVPAAAWARYRDRPLWRLRGILPPDVRITAITEVSS
EFNARFSALSRRYVYRVADTVWGVNPLRRLDTVAWPRPVDLDVMNAAATVLVGEHDFAAF
CKRREGATTVRALRTVRWDRDADGIARATVVADAFCHSMVRSLVGAMLAVGEGRRDAAWL
AALLTRGERSGEVLVAPANGLTLVEVEFPADPSAWAERQLETRRMRTLNGSTAAGQQPTA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgacgtccgtggacgccccggtgacgagccgggcgcgtccacggacgtttcg
cttgtccggctgcggctggacatctgttacgacggcaccgatttcgcgggctgggcgttc
cagccggggcagcgcaccgtggccggggaggtcttcacggcgctgtcggcgctgttcggc
cagcccgagggcctgaccgtcgcgggccgcaccgacgcgggcgtccacgccaccggtcag
gtcgcgcacgtggacgttcccgccgccgcctgggcccgctaccgcgaccggccgctgtgg
cggctgcggggcatcctgccgcccgacgtgcgcatcacggcgatcaccgaggtgtcgtcg
gagttcaacgcccggttctcggccctgtcgcgccggtacgtgtaccgggtcgcggacacg
gtgtggggcgtgaacccgttgcggcgcctggacaccgtggcgtggccgcgtccggtggac
ctggacgtgatgaacgccgccgcgacggtcctggtgggggagcacgacttcgcggccttc
tgcaaacgccgcgagggcgccacgacggtgcgggcgctgcggacggtccgctgggaccgc
gacgccgacggcatcgcgcgcgccacggtcgtggccgacgcgttctgccactcgatggtg
cgcagcctggtcggggcgatgctggccgtcggcgagggccgccgtgacgcggcctggctg
gcggcgctgttgacccgtggcgaacggtccggcgaggtgctggtggcgcccgccaacggc
ctcacgctggtcgaggtcgagttccccgccgatccgtcggcgtgggccgagcggcagctg
gagacccgccggatgcggaccctgaacggctcgacggccgcgggccagcagcccacggct
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