Stackebrandtia nassauensis: Snas_2813
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Entry
Snas_2813 CDS
T01194
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Snas_2813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_2813
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Snas_2813
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ADD42489
UniProt:
D3Q8B5
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All DBs
Position
complement(2959178..2960032)
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AA seq
284 aa
AA seq
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MRASWKGSIVWSLVSMPVKLVPATEDKDVRFHQVHRTDGGRIRQRRFCEIEDVEVPYSEI
AKGYELQSGEVVILEKSDFDALPLPSKKTIDVAEFVDAGDIDPVYFSRSYYVEPDRPVKP
YVLMRDSLAAAGRVAIAKIALTNREHLAVLRPRDDFLMLHIVYWPDEVRKPEFESLGDTV
TVSRQEISMAKKLIESMTVDALDMNEFHDDYRAALLKTIDAKVAGNATVQPEDAEEGGKV
IDLMEALEKSLSKTRSKKAPAKKAAKKTTAKKTAKKSSKSRKAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagagcctcgtggaagggctccatcgtgtggagcctcgtgtcgatgccggtcaaactg
gtgcccgccaccgaggacaaggacgtccgcttccaccaggttcaccgcaccgacggcggc
cggatccggcaacgccgcttctgcgaaatcgaggacgtcgaggtcccctactccgagatc
gccaaaggctacgagctccagtccggcgaggtggtgatcctggagaagagcgacttcgac
gcgttgccgttgcccagcaagaagaccatcgacgtcgccgagttcgtcgacgctggcgac
atcgacccggtctacttctcccggtcgtactatgtggaacccgatcggcccgtgaagccg
tacgtcctgatgcgcgactcgctggccgccgcggggcgggtggcgatcgcgaagatcgcg
ttgaccaaccgggagcatctggcggtgttgcgtccgagggacgacttcctgatgctgcac
atcgtgtactggcccgacgaggtccgcaaacccgagttcgaatcgctgggcgacacggtg
accgtgtcgcgtcaggagatctcgatggcgaagaagctcatcgagtccatgaccgtcgac
gcgctcgacatgaacgagttccacgacgactaccgggccgcgctgctgaagaccatcgac
gccaaggtggccggaaacgcgacggtgcaaccggaggacgccgaggagggcggcaaggtc
atcgacctgatggaagcgctggagaagagcctcagcaagaccaggtcgaagaaggccccc
gcgaagaaggcggcgaagaagacgaccgcgaagaagaccgccaagaagtcgtcgaagtca
cgcaaggccgcctag
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