Stackebrandtia nassauensis: Snas_2905
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Entry
Snas_2905 CDS
T01194
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna00061
Fatty acid biosynthesis
sna00071
Fatty acid degradation
sna01100
Metabolic pathways
sna01212
Fatty acid metabolism
sna02024
Quorum sensing
sna04146
Peroxisome
Module
sna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Snas_2905
00071 Fatty acid degradation
Snas_2905
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Snas_2905
09145 Cellular community - prokaryotes
02024 Quorum sensing
Snas_2905
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sna01004
]
Snas_2905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sna04147
]
Snas_2905
Enzymes [BR:
sna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Snas_2905
Lipid biosynthesis proteins [BR:
sna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Snas_2905
Exosome [BR:
sna04147
]
Exosomal proteins
Exosomal proteins of breast milk
Snas_2905
Exosomal proteins of breast cancer cells
Snas_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
YukD
Motif
Other DBs
NCBI-ProteinID:
ADD42580
UniProt:
D3Q998
LinkDB
All DBs
Position
complement(3056465..3057973)
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AA seq
502 aa
AA seq
DB search
MANVIDPVCRNADSHPESVALRGGSEQWTYRQLRDASLGYAQSLAAAGVDHGDRVLLTAP
SVPEFVMAYMGIQAAGAVVVPINTMATEAEISHVLTDAGCRLAVAWHVVADATAAAAANH
DIPSWILEPGQSKDAAPTVTPVDRLPHDTTAILYTSGTTGRPKGAELTVENLLSAGEIGA
ECSRGTREDRSGTALPLFHVFGQASVMMPALTAGGSLSLLAHFDMNELLAMLREHRITHT
AGVPTIWNALLHAAADTGPQDFPDLTLAVSGGDTLPGKIARAFEERFGCTLREGYGLTET
AAYGTFNQLHRDAKLGHAGSASPRTEVEVRDTDGKPCPQGAVGEVFIKGPTVMKGYWNRP
RETAEVLGEDGWFRTGDLGQFDADGYLRIVDRIKELIIRGGYNVYPSEVEEVLYAHPDVV
EAAVVGVPDEHYGQEVAAMIVARPGSNLTEAQVSEWSRERLSAYKIPRVITFVDTLVKGP
SGKVLKRAIDTSALRLVPLRQP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtcatcgatccggtctgccgcaacgccgactcccaccccgaatccgtcgcg
ctgcgcggcggcagcgagcaatggacctaccgacaactgcgcgacgccagcctcggctac
gcccaatcgctggccgccgccggtgtcgaccacggcgaccgggtgctgctgaccgcgccg
tcggtgcccgagttcgtgatggcgtacatgggcatccaggccgccggagccgtcgtcgtg
cccatcaacaccatggccaccgaggccgagatctcccacgtcctgaccgacgcgggctgc
cgactcgccgtcgcctggcatgtggtggccgacgcgaccgccgccgccgcggcgaaccac
gacattccctcatggatactagaacctggacagtcgaaggacgcggccccgaccgtcacg
ccggtcgaccggctcccgcacgacaccacggcgatcctctacacctccggcaccaccggg
cgccccaagggcgcggaactgacggtggaaaacctgctgtccgccggtgagatcggcgcc
gaatgcagccggggaacccgcgaggaccgctccggcaccgcgttgcccctgttccacgtc
ttcgggcaggcgtcggtcatgatgcccgctttgaccgccggcggttcactgtcactgttg
gcccacttcgacatgaacgagctgctggcaatgctgcgcgagcaccgcatcacccacacg
gcgggggtgccgaccatctggaacgcgctgctgcacgccgccgccgacaccggcccgcag
gacttccccgacctgacgctggcggtgtccggcggcgacaccctgcccggcaagatcgcc
cgcgccttcgaggaacgcttcggctgcacgctgcgggagggctacggcctcaccgagacc
gccgcctacggcaccttcaaccagctgcaccgcgacgcgaagctcggccacgccggaagc
gcctcaccacgcaccgaagtggaggtcagggacaccgacgggaagccgtgtccgcaggga
gccgtcggcgaggtcttcatcaagggccccaccgtcatgaagggctactggaaccggccg
cgggagaccgccgaggtgctcggtgaggacggctggttccgcaccggcgacctgggccag
ttcgacgccgacgggtacctgcgcatcgtcgaccgcatcaaggaactgatcattcgtggc
gggtacaacgtctaccccagcgaggtcgaggaggtgctgtacgcgcatcccgacgtcgtc
gaggcggcggtggtgggagtccccgacgagcactacgggcaagaggtcgccgcgatgatc
gtcgccaggccgggttcgaacctgaccgaagcacaggtcagcgagtggagccgcgagcgg
ctgtcggcgtacaagatcccgcgcgtcatcacgttcgtcgacacgcttgtcaagggcccc
agcggaaaggtactcaaacgcgccatcgacacatccgcgctgcggttagtcccgttgcgg
cagccgtag
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