Stackebrandtia nassauensis: Snas_3192
Help
Entry
Snas_3192 CDS
T01194
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Snas_3192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sna03000
]
Snas_3192
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_3192
Enzymes [BR:
sna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Snas_3192
Transcription factors [BR:
sna03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Snas_3192
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Snas_3192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
DUF6918
Motif
Other DBs
NCBI-ProteinID:
ADD42862
UniProt:
D3QBI0
LinkDB
All DBs
Position
complement(3371396..3372889)
Genome browser
AA seq
497 aa
AA seq
DB search
MHEDFERCVRAVQSKDARFDGWFFTAVTSTGIYCRPSCPVVPPKPENMRFYPSSAAAQAA
GFRACKRCRPDASPGSPEWNVRADVVARAMRLIADGVVDREGVSGLAARLGYSVRQLERQ
VRGELGAGPGAVARAQRASTARLLIETTDLAFGQIAFAAGFSSIRAFNDTVVRVFALSPT
SLRQRAKSRAVSGGSGALSLRLPFRQPLCPDNVFGHLAATAVPGVEEWRDGAYRRTLRLP
HGPGVVSLRPGPDHVGCVLWLSDLRDLSIAIARCRWLLDLDADPVAVDELLSRDEVLAPL
VAKAPGRRVPRTVDPGEFAVRAVLGQQVSTAAARTHAARLVARYGQRVEDPGGGLTHLFP
SPGELAGLDPDGLAMPVSRKNTLLGLVRALVDGDVELGVGVDWRSAKEALSALPGFGPWT
VESIAMRALGDPDAFVASDLGIRLAAEQLGLPTGARALVERSRAWMPWRAYAVQYLWATG
EHAINVLPSGDIVSEVG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggatttcgagcggtgtgtgcgggcggttcagtcgaaggatgcccggtttgat
ggctggtttttcacggcggtgacgtcgacggggatttattgtcggccgtcgtgtccggtg
gtgccgccgaagcctgagaatatgcggttctatccgtcgtcggcggcggcgcaggcggcg
gggtttcgggcgtgtaagcggtgtcgtccggatgcgtcgccggggtcgcctgagtggaat
gtgcgggcggatgtggtggcgcgggcgatgcggttgatcgctgatggtgtggtggatcgt
gagggtgtgtcggggttggcggcgcgtttggggtatagcgtgcggcagttggagcggcag
gtgcggggtgagttgggggcggggcctggtgcggtggcgcgggcgcagcgggcttcgacg
gcgcggttgttgattgagacgacggatttggcgtttggtcagattgctttcgcggcgggg
ttttcgagtattcgggcgttcaatgacacggtggtgcgggtgttcgcgttgtcgccgacg
tcgcttaggcagcgggcgaagtcgcgggcggtgtcgggtggttcgggtgcgttgagtttg
cggctgccgtttcggcagccgttgtgtccggacaatgtgttcggtcatttggcggccacg
gcggtgccgggggttgaggagtggcgggatggcgcgtatcggcggacgttgcggttgccg
catgggccgggggtggtgtcgcttaggcctgggccggatcatgtgggttgtgtgttgtgg
ttgagtgatctgcgggatttgtcgatcgcgatcgcgcggtgtcggtggttgctggatttg
gacgctgatccggtggcggtggatgagttgttgtcgcgggatgaggtgttggcgccgttg
gtggccaaggcgccggggcgtcgggtgccgaggacggtggatccgggtgagttcgcggtg
cgggcggtgttgggtcagcaggtgtcgacggcggcggcgcgcacgcacgcggcgcggttg
gtggcgcggtatgggcagcgcgtggaggatccgggtggcgggttgacgcatttgttcccc
tcccccggtgagttggcgggtttggatccggatgggttggcgatgccggtgtcgcggaag
aacacgttgctgggtttggtgcgggcgttggtggatggtgatgtggagttgggtgtgggg
gtggattggcggtcggcgaaggaggctttgtcggcgttgccggggtttgggccgtggacg
gtggagtcgatcgcgatgcgggcgttgggtgatccggatgcttttgtggcctcggatttg
gggatccggttggcggcggagcagttggggttgccgacgggtgcgcgggcgcttgtggag
cggtcgcgggcgtggatgccgtggcgggcttatgcggtgcagtatttgtgggcgacgggt
gagcatgcgatcaatgtgctgccgagcggcgacatcgtgtcggaggtggggtga
DBGET
integrated database retrieval system
