Stackebrandtia nassauensis: Snas_3769
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Entry
Snas_3769 CDS
T01194
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03030
DNA replication
sna03410
Base excision repair
sna03420
Nucleotide excision repair
sna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Snas_3769
03410 Base excision repair
Snas_3769
03420 Nucleotide excision repair
Snas_3769
03440 Homologous recombination
Snas_3769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sna03032
]
Snas_3769
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_3769
Enzymes [BR:
sna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Snas_3769
DNA replication proteins [BR:
sna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Snas_3769
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Snas_3769
NER (nucleotide excision repair)
GGR (global genome repair) factors
Snas_3769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ADD43426
UniProt:
D3PXU6
LinkDB
All DBs
Position
complement(4022089..4024815)
Genome browser
AA seq
908 aa
AA seq
DB search
MSVVAAIVLRVTTRPRLLLIDGHSMAFRAFFALPAENFSTSTGQHTNAAYGFTSMLINVL
RDEAPTHVAVAFDVSRKSFRTEEYPEYKDGRATTPEEFKGQVPLIQQILDALGIQWITLD
NYEADDILATLSHQAGAEGYETLICSGDRDSFQLVTGDTTVLYPVKGVSELARMTPEAVE
AKYGVSPQRYRDLAALVGEKSDNLPGVPGVGPKTAAKWITTYEGLDGVIAAADAIKGKAG
QSLRDHLSDVMRNARLNKLVTDLELASRPEGLAWSGWDAEATSEIFSVLEFASLRDRLAS
QLADKRIGEDPEPVGATEVAEADLAVLEPGQLAAWLSARAGTGRIGVAATGEFKHGAGRL
SGLALASDGHHAWLDPSALDEADENALAAWLADPTATKAVHDAKRFGLACRSHGWNLDGV
TSDTALAAYLVRPDLKSDSLEALATRYLGRELNPRTAAAQPTLDGLETDGENEAAANLAA
LAAATRDLAEVLDGELASHNAAGLLADMELPVMTVLTEMEAIGITADVAHLTGLESTFAA
EAAEAVAAAHAAVDQTFNLRSPKQLQEILFDKLGMPKTKRTKTGYTTDADSLAGLYATTQ
HPVLEAILRHRDREKLKQTVSGLLAEVAEDGRIHTTYQQNVAATGRLSSKDPNLQNIPVR
TDAGRRIRQGFIVTEGFETLMTCDYSQIEMRIMAHLSGDEGLIEAFKSGEDLHTTVAARV
FNVEPGSVDAEQRRRIKAMSYGLAYGLSAYGLSQQLGITPEEARGLMEEYFTRFGGVRDY
LRTVVEEARKAGYTETMFGRRRYLPDLNSDNRQRRDMAERAALNAPIQGSAADIMKIAML
NVHRALVAAKVKSRVLLQVHDELVLEIAPGEAPEVEKLVRAEMASAAELMVPLEVSVGTG
GDWDTAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtggccgctattgtcttgcgggtgactactcgaccgcgtctgctgctgatc
gacggccattcgatggcgtttcgcgcgttcttcgcgctgcccgccgagaacttctccacc
tccaccggccagcacaccaacgcggcctacgggttcacatcgatgctcatcaacgtcctg
cgggacgaggcccccacccacgtcgcggtggccttcgacgtgtcccgcaagtcgttccgc
accgaggagtaccccgagtacaaggacggccgcgccaccacgcccgaggagttcaagggc
caggtgccgctgatccagcagatcctcgacgccctgggcatccaatggatcacattggac
aactacgaggccgacgacatcctcgccaccctgtcgcaccaggccggtgccgagggctac
gagaccctcatctgttccggcgaccgcgactcgttccagctggtcaccggtgacaccacc
gtcctgtaccccgtcaagggcgtctccgaactggcccgcatgacccccgaggccgtcgag
gccaagtacggggtctcgccgcagcgctaccgtgacctggccgcgctggtgggggagaag
agcgacaacctccccggcgttcccggcgtcggccccaagaccgccgccaagtggatcacc
acctacgagggcctggacggcgtcatcgccgccgccgacgccatcaagggcaaggccggt
cagtcgctgcgcgaccacctgtccgacgtcatgcgcaacgcccggctcaacaagctcgtc
accgacctggaactggcctcccgacccgagggcttggcctggagcggctgggacgccgag
gccacctcggagatcttctcggtgctggagttcgcctcgttgcgcgaccggctggcctcc
cagctggccgacaaacgcatcggcgaggaccccgaaccggtgggcgccaccgaggtcgcc
gaggctgatctcgcggtcctggaacccgggcagctggccgcctggctgtcggcgcgcgcc
ggaaccggccgcatcggcgtcgccgcgaccggcgagttcaagcacggcgccggacgactg
tcgggcctggccctggcctccgacggacaccacgcctggctcgatccgtccgcactggac
gaagccgacgagaacgccctggccgcgtggctggccgaccccacggccaccaaggccgtg
cacgacgccaaacgcttcggcctggcctgccgcagccacggctggaacctcgacggcgtc
accagtgacacggcgctggccgcctacctggtgcgtcccgacctgaagtcggactcgctg
gaggcgctggccacccgctacctgggccgggaactgaacccccgcaccgccgccgcgcag
cccacactggatggcctggagaccgacggcgagaacgaggccgccgcgaacctggccgcg
ctggccgccgccacccgcgacctggccgaggtgctggacggcgaactggccagccacaac
gccgccggtctgctggccgacatggaactgccggtcatgacggtgctgaccgagatggag
gccatcggcatcaccgccgacgtcgcccacctcaccggcctggagtccaccttcgccgcc
gaggcggccgaggccgtggccgccgcgcacgccgccgtcgaccagaccttcaacctgcgc
tcgcccaagcagttgcaggagatcctgttcgacaagctcggcatgcccaagaccaagcgc
accaagaccggctacaccaccgacgccgactcgctggccgggctgtacgcgaccacccag
cacccggtgctggaggcgatcctgcggcaccgcgaccgcgagaagctcaagcagaccgtg
tcgggcctgctggccgaggtcgccgaggacggtcgcatccacaccacctaccagcagaac
gtcgcggccaccggtcgtctgtcctcaaaagacccgaacctgcagaacatcccggtgcgc
accgacgcgggtcgccggatccggcagggcttcatcgtcaccgagggcttcgagaccctg
atgacctgcgactactcgcagatcgagatgcgcatcatggcgcacctgtccggcgacgag
ggcctgatcgaggcgttcaagtccggcgaggacctgcacaccaccgtcgcggcccgggtg
ttcaacgtggagcccggctcggtggacgccgagcagcggcgccgcatcaaggcgatgtcc
tacggtctggcctacgggctgtcggcctacgggctgtcgcagcagctgggcatcacgccc
gaagaggcccggggcctgatggaggagtacttcacccgcttcggcggcgtgcgggactac
ctgcgcacggtggtcgaggaggctcgcaaggcgggctacaccgagaccatgttcggccgc
cgccgctatctgccggacctcaacagcgacaaccgacagcgccgcgacatggccgaacgc
gccgccctcaacgccccgatccagggcagcgcggccgacatcatgaagatcgcgatgctc
aacgtccaccgcgcactggtcgcggcgaaggtgaagtcgcgggtgctgctccaggtccac
gacgaactcgtgctcgagatcgcccccggcgaagcgcccgaggtcgagaaactggtgcgc
gccgagatggcctcggccgccgagctgatggtgccgctggaagtctcggtcggcaccggc
ggcgactgggacaccgccgcgcactga
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