KEGG   Stackebrandtia nassauensis: Snas_4192
Entry
Snas_4192         CDS       T01194                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sna  Stackebrandtia nassauensis
Brite
KEGG Orthology (KO) [BR:sna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sna03400]
    Snas_4192
Enzymes [BR:sna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Snas_4192
    5.6.2.6  RNA 3'-5' helicase
     Snas_4192
DNA repair and recombination proteins [BR:sna03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Snas_4192
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH AAA_25 Acetyltransf_6 AAA_22
Other DBs
NCBI-ProteinID: ADD43842
UniProt: D3Q2A9
LinkDB
Position
4488413..4493017
AA seq 1534 aa
MTTEPLAAFSRPTRAWFAERFGAPTPAQAGAWEAIARGDNALVVAPTGSGKTLSAFLWSL
DRLATTPKPEDPKRRCRVLYVSPLKALAYDVERNLRQPLAGIGEEAKRLGVEAPDVSVSM
RTGDTPADQRRAFARTPSDILITTPESLFLLLTSAARDALRGIDTVIIDEVHAVCGTKRG
AHLALCLERLDALLPQPAQRIGLSATVRPIEETARYVGGPRPVTIVKPPAAKTIELSVDV
TVPDLADLTDVDEQGQPSIWPSIVKRLHDLIEANRSTIVFVNSRSLAERLCSRLNEVVVK
HDTPYRSQPAYIMAQSSAAAGVMPVLARAHHGSMSREERLQVETGLKSGELRAVVSTSSL
ELGIDMGAVDLVVLIGSPPSVASGVQRVGRAGHQVGAVSQGVVLPTHRSDLLAATVAAER
MLDGGIEELRPPSNPIDILSQHLVSMVAMDDWRVDDLARVVRGAAPFASLSDEALRSVLD
MVSGKYPSTGFSGLKPKLVWNRATGRLTARPGAQRLAVLNAGTIPDRGLYGVYLAEGGTG
SRVGELDEEMIYESRVGDVFLLGATSWRIESITPDRVLVSPAPGQAARMPFWKGEDVGRP
AEFGRAIGVRLRELTNESEANAGGKRHAADGEPGAANAGATATASDGASADESEESPAGK
RNAADGTSGGASSRRHGLPGSAGSVLADSAASNLAAYVDQQREHTGAVPDDRTVVVERFR
DELGDWRVIVHCLLGARVNRPWALAIAARLRERLGVDAHAMGTDDGIVLRIPDMTDPPGA
ELLAFEPEAITRIVTEQLTASPLFSARFRECAARALLLPRKAIGRRQPLWQQRQRAAQLF
EVAREFTDFPITAEAARECLEEYFDMDALTGLMRSLAERSTAAVDVVTESASPFALSILS
SFVAGNLYGEDEPLAERRAAAFNSGLLDELLGEGDQLLDPAVVAEAEAWLQWRDGRDLSG
AEDVAELLRVVGDQSDGDLAERGIAVAAAEELEAAGRAVAVTVAEQRRWIAVEDAVRYRD
GLGVELPELPPELLSTNGTGATAGSPTPDPLDDLVARYARTHGPFETAECAERFGLPGPL
VEAALHRLDADGVVRHGSYTQDGSRQWCAVDVLRLLRRKTLAALRAEISPVPVAKYVSFL
ADWQGVGGKAIGTDAVADVLDQLQGTAIPASAWESTVLPVRVGEYSPAQLDELTGSGELL
WSGSGGLPGTDGWLTFAYAETAPLLLPLPDEEAIAGDLHRELLDALESPRFFRDLTGVVE
GDDPEVLEALWDLVWGGWVSNDSLAPLRAKLSGPSPKPQQSRRPRRPGRFTVTRQAVRSA
PPSAAGRWYRLPDRDTDPTRRAHAATATLLDRHGVVVRGAAAGHASGFAGQYPILSAMEE
RGAARRGYFVSGLGAAQFAEPGAVDRLRSATPKGALVLAACDPANPFGAGMPWPARSSEE
SGHRAGRKAGALVVIVDGELAWYVERGGRTILTYTADRQRTVAAAEALVATANRGGLARV
TVTHVDGTPIAGTPVGAALTEAGLRATPKGLKFG
NT seq 4605 nt   +upstreamnt  +downstreamnt
atgaccaccgaaccgctcgccgccttcagccgaccgacccgggcctggttcgccgaacgg
ttcggcgctcccacgcccgcgcaggcgggggcctgggaggcgatcgcgcggggcgacaac
gcgctcgtggtggcacccaccggttccggcaagacgctgtcggcgttcctgtggtcgctg
gaccggctggcgaccacgcccaagcccgaagaccccaagcggcggtgccgggtgctgtac
gtcagcccgctcaaggcgctggcctacgacgtcgaacgcaacctgcggcagccgttggcg
ggcatcggtgaggaggcgaagcggctgggcgtggaggcgccggacgtgtcggtgtcgatg
cgcaccggcgacaccccggccgaccagcgccgcgccttcgcccgcacgccgtccgacatc
ctcatcaccacacccgagtcactgttcctgctgttgacctcggcggcccgcgacgcgttg
cgcggcatcgacacggtgatcatcgacgaggtgcacgcggtgtgcggcaccaagcggggc
gcgcacctggcgctgtgcctggaacggctggacgcgctgcttccgcaaccggcgcaacgc
atcgggctgtcggcgacggtgcggccgatcgaggagaccgcccggtacgtgggcgggccg
cggccggtgacgatcgtgaagccaccggcggccaagaccatcgagctgtcggtggacgtg
accgtcccggacctggccgacctgaccgacgtcgacgagcaggggcagccctcgatctgg
ccgtccatcgtcaagcggctgcacgatctgatcgaagccaaccggtccaccatcgtgttc
gtcaactcgcgttcgctggccgagcggttgtgttcgcggctcaacgaggtcgtcgtcaaa
cacgacaccccctaccgctcgcaaccggcgtacatcatggcgcagtcctcggccgccgcc
ggggtgatgccggtgctggcgcgcgcccaccacggctcgatgtcgcgggaggagcggctc
caggtcgagacggggctgaagtcgggcgagctgcgggccgtggtgtcgacgtccagtctg
gaactgggcatcgacatgggcgcggtggacctggtggtgctcatcggttccccgcccagt
gtggcctcgggcgtgcagcgggtcggccgggccggccaccaggtcggcgcggtgtcgcag
ggcgtggtgctgccgacccaccgttccgacctgctggccgcgaccgtcgcggccgaacgg
atgctggacggcggcatcgaggaactgcggccaccgtccaacccgatcgacatcctgtcg
cagcacctggtgtccatggtggccatggacgactggcgggtcgacgacctggcccgggtg
gtgcgcggggcggcgccgttcgcctcactgtcggacgaggcgctgcgctcggtgctggac
atggtgtcgggcaagtatccgtccaccgggttctccggtctgaagccgaaactggtgtgg
aaccgggccaccggcaggctcacggcacggccgggggcacagcggctggcggtcctcaac
gcgggaacgatcccggaccggggcctgtacggggtgtacctggccgagggcggcacgggt
tcccgggtcggggagctggacgaggagatgatctacgagtcgcgagtgggcgacgtgttc
ctcctgggcgccacctcatggcggatcgagtcgatcacacccgaccgggtactggtgtcc
ccggcgccgggacaggcggcccgcatgccgttctggaagggcgaagacgtgggccgcccc
gccgagttcgggcgcgcgatcggagtacgcctacgcgagctgaccaacgagagcgaggcg
aacgcgggcgggaagcgccacgcggccgacggcgagccgggcgccgcgaacgcgggcgcg
acggccaccgcctccgatggcgcgtcagccgacgagagcgaggagagcccggccgggaag
cgcaacgcggccgacggcacgtccggcggcgcgagctcgcgccgccacggtttgccgggc
tcggccgggtcggtgctggccgattcggcggcgagcaacctggccgcctatgtggaccag
cagcgggagcacaccggggcggtgcccgacgatcgcactgttgtggtggagcggttccgc
gacgagctgggtgactggcgcgtcatcgtgcactgtctgctgggcgcgcgggtgaatcgg
ccgtgggcgttggcgatcgccgcgaggttgcgggagcggctcggcgtcgacgcccacgcc
atgggcaccgacgacggcatcgtgctgcgcatccccgacatgaccgacccgcccggcgcc
gagctgttggccttcgagccggaggccatcacccggatcgtcaccgagcagctgaccgcc
tcgcccctgttctcggcccggttccgggagtgcgccgcgcgggcactgttgttgccgcgc
aaggcgatcggacgcaggcagccgctgtggcagcagcggcagcgcgccgcgcagctgttc
gaggtggcgcgcgagttcaccgacttccccatcaccgccgaggccgcgcgggagtgcctg
gaggagtacttcgacatggacgccctgaccgggctgatgcgaagcctcgccgagcgctcc
accgccgctgtggacgtcgtgaccgagtcggcctctccgttcgcgctgagcatcctgtcg
tcgttcgtggccgggaacctgtacggggaggacgaaccgctggccgagcgccgggcggcg
gcgttcaactccggactgctggacgagctgctcggcgagggcgatcaactgctcgacccc
gcggtggtggccgaggccgaggcgtggctgcaatggcgcgacggccgagacctgtcgggc
gccgaggacgtggcggaactgctgcgggtcgtcggcgaccagtcagacggagatctcgcg
gagcgcggcatcgccgtcgcggccgccgaagagctggaggcggccggacgcgcggtggcg
gtcacggtggccgaacagcgacgctggatcgccgtggaggacgcggtgcgctaccgcgac
ggccttggagtggagctacccgagctgccgccggaactgttgtcgaccaacggaaccggc
gcgacggccggttcgccgacaccggaccccctggacgacctggtcgcccgctacgcccgc
acccacggtccgttcgagaccgccgaatgcgccgagcgcttcggactccccggtccgctc
gtcgaggcggctctgcaccggctggacgccgacggcgtcgtccgacacggatcgtacaca
caggacggatcacggcagtggtgcgccgtggacgtgctgcgcctgttgcggcgcaagacc
ctcgcggcgctgcgcgccgagatctcaccggtgccggtcgccaagtacgtgtcgttcctg
gccgactggcagggcgtcggcggcaaggcgatcgggaccgacgcggtggccgacgtcctg
gatcagttgcagggcaccgcgatccccgcctcggcctgggagtcgacggtgctgccggtg
cgggtgggcgagtactcccccgcccagctggacgagctgaccggctccggcgaactgctg
tggagcggttcgggcggcctgccgggcaccgacggctggctgaccttcgcctacgccgag
accgcgccgctgctgctgccgctgcccgacgaggaggcgatcgccggtgacctgcaccgg
gaactgctggacgccttggagtcgccccggttcttccgcgacctgaccggcgtggtcgag
ggcgacgaccccgaggtgctggaggcgctgtgggacctggtgtggggcggctgggtgtcc
aacgactcgctggcaccgttgcgcgccaagctttccgggccgtcgcccaaaccgcagcag
tcgcgccgtccccgtcggccgggccggttcaccgtcacccggcaggcggtgcgttccgcc
ccgccgtcggcggccggacgctggtaccggctgcccgaccgcgacaccgacccgacccgc
cgcgcccacgccgccaccgcgaccctgctggaccggcacggcgtcgtggtgcggggcgcc
gccgccggtcacgccagcggcttcgcgggccagtacccgatcctgtcggcgatggaggag
cgcggcgccgcccggcgcgggtacttcgtgtccggtctgggcgcggcccagttcgccgaa
cccggtgccgtggaccggctccgctcggcgacccccaagggcgcgctggtgctggcggcc
tgcgacccggccaaccccttcggcgccgggatgccgtggcccgcccgctccagcgaggag
tcgggccaccgcgcgggccgcaaggccggggcgctggtggtcatcgtcgacggcgaactg
gcctggtacgtcgaacgcggcggccgcaccatcctgacctacacggccgaccgacagcgc
accgtcgcggcggccgaggccctggtcgcgaccgccaaccggggcgggctggcccgcgtc
accgtcacccacgtcgacggcaccccgatcgcgggcaccccggtcggcgcggccctgacc
gaggcgggcctgcgcgcgaccccgaagggcctcaagttcggctag

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