Stackebrandtia nassauensis: Snas_4390
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Entry
Snas_4390 CDS
T01194
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03030
DNA replication
sna03430
Mismatch repair
sna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Snas_4390
03430 Mismatch repair
Snas_4390
03440 Homologous recombination
Snas_4390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sna03032
]
Snas_4390
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_4390
Enzymes [BR:
sna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Snas_4390
DNA replication proteins [BR:
sna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Snas_4390
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Snas_4390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADD44037
UniProt:
D3Q3X0
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All DBs
Position
4680637..4682373
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AA seq
578 aa
AA seq
DB search
MSSQGTSGYVQPSFEDLGTPLSEVTFMVVDLETTGVASDACSITEIGAVKVRGGEVLGEY
ATLVNPGEAIDARISALTGITDAMVADAPAIEEVLPSFLEFARGAVWVAHNAPFDVGFLR
SACAQAELPWPRPQVVDTVVLARRLVDRSEVPNKRLSTLARYFGARVKPSHRALDDARAT
VDVLHALLERLGTHYVLTDEDLADFQRVIPAAERRKKRHLAEGLPHAPGVYVFRDAEDRP
LYVGTSVDLAARVRGYFSAGETRGKMRDMLRLAERVEAIECAHRLEAGVREVRLIGATKP
PFNRRSKYPERVLWLRLTAEAYPRLSVARTPPEAGSAWLGPFTSQRSAEYARDAVHDALP
LRQCRTRLSPRKVSSACALAEMGCPAPCQLSIGVDEYGKIAAGFAEAVAADPAAIVDPLL
ARIAQLSDAHRFEEAAEARSRLAAFLRGVKRTQRVSALVRIAELVAAKPAAGGGWELAVV
RHGVLAAAGTSPPRTDPMPLVDSLRAESSTVVPDAAVLAASRLGETELIADWLESDGVRL
VHSESGWWLPASGAGKYQSLLRRLSAADAARRVEFQIP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagtcaagggacgtccggctacgtccaaccgtcttttgaggatctgggcaccccg
ctgtccgaagtgaccttcatggtcgtcgatctggagacgaccggcgtggcctccgacgcg
tgctcgatcaccgagatcggcgcggtgaaggtgcgcggcggcgaggtgctgggcgagtac
gccaccctcgtcaaccccggcgaggccatcgacgcgcgcatcagcgccctgaccggcatc
accgacgcgatggtcgccgacgccccggccatcgaggaagtactaccatcctttttggag
ttcgcgcggggcgcggtgtgggtggcgcacaacgcgcccttcgacgtgggtttcctgcgc
agcgcctgcgcacaggccgagctgccgtggccgaggccgcaggtggtggacaccgtggtc
ttggcgcggcggctggtggaccgcagcgaggtccccaacaagcggctgtccactctggcg
cggtacttcggtgcccgggtcaagcccagccaccgggccctggacgacgctcgcgccact
gtggacgtcctgcacgcgctgctggagcggctgggcacccactacgtgctcaccgacgag
gacctcgccgatttccagcgcgtcatcccggccgccgagcgccgcaagaagcggcatctg
gccgaggggctgccgcacgcgccgggcgtgtacgtgttccgcgacgccgaggaccgtcca
ctgtatgtgggcacctcggtcgacctggccgcccgggtgcgcggttacttctccgccggg
gagacccgcggcaagatgcgcgacatgttgcggctggccgagcgggtcgaggccatcgag
tgcgcgcaccggctggaggccggggtgcgggaggtgcggctcatcggcgccaccaagcca
ccgttcaaccggcgctccaagtatccggagcgggtgctgtggctgcggttgacggccgag
gcctatccccggctgtcggtggcccgcacgccgcccgaggcgggctcggcctggctgggg
ccgttcacctcgcagcgttcggccgagtacgcccgcgacgcggtgcacgacgcgctgccg
ctgcggcagtgccgcacccggttgtcgccgcgcaaggtctcctcggcgtgcgcgctggcc
gagatgggctgcccggccccgtgtcagttgtcgatcggcgtggacgagtacggcaagatc
gccgcgggtttcgccgaggccgtcgccgccgacccggccgcgatcgtggatccgctgctg
gcgcggatcgcgcagttgtcggacgcgcaccgcttcgaggaggccgccgaggcgcggtcg
cggctggcggcgttcctgcgcggcgtcaagcgcacccagcgggtgagcgcgctggtgcgg
atcgcggagctggtggcggccaaacccgccgccggtggtggctgggaactggcggtggtg
cgccacggggtgttggccgcggcgggtaccagtccgccccgcaccgatcccatgcccctt
gtggactcactgcgcgccgaatcctctactgtggtccccgacgcggccgtactggccgcc
tccaggctcggcgagaccgaactgatagccgattggctggaatccgacggggtccgattg
gtacacagcgaatccggctggtggctgcccgcgtccggggccgggaagtatcagtcactc
ctgcgtcggctcagtgccgctgacgccgcacggcgagtagagtttcaaataccatag
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