Stackebrandtia nassauensis: Snas_4584
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Entry
Snas_4584 CDS
T01194
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03420
Nucleotide excision repair
sna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Snas_4584
03430 Mismatch repair
Snas_4584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_4584
Enzymes [BR:
sna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Snas_4584
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Snas_4584
MMR (mismatch excision repair)
Other MMR factors
Snas_4584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADD44228
UniProt:
D3Q6I5
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All DBs
Position
4893686..4896811
Genome browser
AA seq
1041 aa
AA seq
DB search
MTEPRYTARALARLLGDEYPPTEQQATAIEAPLRPQLIVAGAGSGKTGTMASRVVWLIAN
GYARPEQILGLTFTRKAAAELASRIRERLARLSGLDGVGQLSGEPTVSTYHSYASGIVSE
HGPRIGLEPGTVLSPAQTWQLAYAAVRGHDGDMSAVSLTVETVVKRVLSLSDELSEHLRE
PEELEQFTQELANEIGERVGKGTQKTAQLLMALQSRLQLLPIVADYRRRKRAEGAVDFAD
QLHYAASAAAAAPEVGRVERERFGVVLLDEYQDTSHAQVELLKSLFGGGHPVTAVGDPCQ
SIYAWRGASTGTLSRFPGDFPHADGTEADRLELTASWRNRASILTVANTVSEPLRTMGFP
VSPLEPGVPGEGEVTAAMLNTADDEAEWVATRIYRLWADNGFAPGSPVEGMPPTTAVLAR
RRSQIPRLEKALRAKGLPVEVIGLGGLLDAPEVRELHSTLTVLARPTAGPAFMRLLTGPR
WRIGPRDIAALHARARELAPERRGFEPSAEGLNEASLAEALEDLGDLRRYSDAAAERYTA
LREELGYLRSRLDQPVSDLIAEILKVSGLDIEVAVHRGDSERLDAFIDEAVRYTSTASLP
SLDGFLSYLDAAEERERGLELTGTTEHTGAVQILTVHAAKGLEWDCVAVPGLAKGVLPGK
VMGGSWLTDTGKLPYPLRGDAAELPYFRLGGVTKAAELSRAEAEFKKDVQFHHEVEERRL
AYVALTRARTHLFACGYWWDDGESAREPSPYLDETVAAGGRVDEWIEDPGEENPLLATEL
SADWPEPEPLGSNQITVAAAAGAVRASDGALDDSAQAKRWAEEAELLLAERAESASDGME
VPVPSQLSVSQLVAWHADAQEFAARLRRPVPEPPAPHTRRGTAFHAWVEKRFDGGTLFDM
DDLPGAADGEPDTDAELAALQEAFNASEWASRTPIAVEVPFVTVLEGVVVRGRMDAVFAT
DDGGYEIVDWKTGRPPRGHAAKAAAVQLAAYREAWAVLRGVHRSKVSAAFHYVRQNVTVR
PSGLPLLEQLAAPLGPTPPQE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaaccgaggtacacggcccgagcgctggcgcggcttttgggcgacgagtatccg
ccgaccgagcagcaggccaccgccatcgaggcgccgctgcgaccgcagctgatcgtcgcc
ggtgccggttccggcaagaccgggacgatggcctcgcgggtggtgtggctgatcgccaac
ggttacgcccgccccgaacagatcctcgggctgaccttcacccgcaaggccgccgccgaa
ctggcgtcgcggatccgggaacgactcgcgcgactgtcgggtctggacggtgtcgggcag
ctgtcgggcgaaccgacggtgtccacataccactcctacgcctccgggatcgtcagcgaa
cacggcccccgcatcgggttggaacccgggaccgtgctgtccccggcgcagacctggcag
ctggcctacgcggcggtgcgcggccacgacggcgacatgagcgcggtgagcctcaccgtc
gagaccgtcgtgaaacgggtgctgtcgctgtcggacgaactgtcggagcacctgcgcgaa
cccgaggagctggagcagttcacccaggagctcgccaacgagatcggcgagcgggtcggc
aagggcacccagaagaccgcgcaactgttgatggcgctgcaatcgcggctgcaactgctg
ccgatcgtggccgactaccggcgccgcaagcgcgccgagggcgcggtggacttcgccgac
cagctgcactacgcggcttcggccgccgcggcggcccccgaggtgggccgggtggagcgg
gaacggttcggcgtggtgctgctggacgagtaccaggacacctcgcacgcccaggtggag
ctgctgaagtcgctgttcggcggcgggcacccggtcacggccgtcggcgacccgtgccag
tcgatctacgcgtggcggggcgccagcaccgggacgctgtcgcggttccccggcgacttc
ccgcacgccgacggcaccgaggccgaccggctggagctgaccgcgtcgtggcgcaaccgg
gcgtccattctcaccgtcgccaacaccgtttcagaaccgttgcgcaccatgggtttcccg
gtttccccactggaacccggcgtgccgggcgagggagaggtcaccgccgccatgctcaac
accgccgacgacgaggccgagtgggtcgccacccggatctaccggctgtgggcggacaac
ggcttcgcgccgggcagcccggtggagggcatgccaccgaccacggcggtgctggcgcgg
cgccgctcccagatcccccggctggagaaggcgttgcgcgccaagggcctgccggtggag
gtcatcggcttgggcggactgctggacgcgcccgaggtgcgggaactgcactcgacgctg
accgtgctggcccggccgacggcgggcccggccttcatgcggctgctgaccggcccccgg
tggcggatcgggccgcgcgacatcgccgccctgcacgcccgggcccgggaactggcgccc
gaacgtcgcggcttcgaacccagcgccgagggcctcaacgaggccagtctcgccgaggca
ctggaggacctgggcgacctgcgccgctacagcgacgccgccgccgaacgctacaccgcg
ctgcgggaagaactggggtacctgcgttcccggctggaccagccggtcagcgacctgatc
gccgagatcctgaaggtctcgggactcgacatcgaggtcgcggtgcaccgaggcgactcc
gaacggctggacgcgttcatcgacgaggcggtccgatacacctcgacggcctcactgccc
agtctggacggtttcctctcctatctggacgcggccgaggaacgggagcgcggcctggag
ttgaccggcaccaccgagcacaccggagcggtgcagatcctcaccgtccacgccgccaag
ggcctggaatgggactgcgtggcggttcccggcctggccaagggggtgctgcccggcaag
gtgatgggcggttcctggctgaccgacaccggcaaactcccgtacccgctgcgcggcgac
gccgccgagctgccgtacttccggctgggcggggtcaccaaggccgccgaactgtcgcgg
gccgaggccgagttcaaaaaggacgtccagttccaccacgaggtcgaggagcggcgactg
gcctatgtggccctgacccgggcccgcacccacctgttcgcgtgcgggtactggtgggac
gacggcgagagcgcccgcgaaccctcgccctacctcgacgagaccgtcgcggccggtggc
cgggtcgacgagtggatcgaggaccccggcgaggagaacccgctgctggccaccgagttg
agcgccgactggcccgagccggaacccctgggctccaaccagatcacggtggcggcggcg
gccggtgccgtgcgggcctccgacggcgccctggacgattccgcgcaggccaaacgctgg
gccgaggaggccgaactgctgctggccgagcgcgccgagtccgcgtccgacggcatggag
gtgccggtgccgtcgcagttgtcggtgtcgcagctggtggcctggcacgccgacgcgcag
gagttcgcggcccggttgcgccgtccggtgcccgagcccccggccccgcacactcggcgc
ggcaccgccttccacgcgtgggtggagaaacgcttcgacggcggcaccctgttcgacatg
gacgatctgcccggggccgccgacggcgaacccgacaccgacgccgaactggcggcgttg
caggaggcgttcaacgcctcggagtgggcctcgcgcaccccgatcgcggtcgaggtgccg
ttcgtgaccgtcctggagggagtggtggtgcgaggccgcatggacgcggtgttcgccacc
gacgacggcggttacgagatcgtggactggaagaccggacggccgccccgcggccacgcg
gccaaggccgcggcggtgcagctggccgcctaccgggaggcctgggcggtactgcggggc
gtccaccggtccaaggtgtcggcggcgttccactatgtccggcagaacgtcaccgtccgg
ccgagcggcctgccgctgctggaacagctggccgcaccgctgggacccacgccgccgcaa
gagtaa
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