Stackebrandtia nassauensis: Snas_5059
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Entry
Snas_5059 CDS
T01194
Name
(GenBank) transcriptional regulator, IclR family
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
sna
Stackebrandtia nassauensis
Pathway
sna02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Snas_5059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sna03000
]
Snas_5059
Transcription factors [BR:
sna03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Snas_5059
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Rrf2
YcaO
TrmB
HTH_9
Motif
Other DBs
NCBI-ProteinID:
ADD44695
UniProt:
D3QAP9
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All DBs
Position
5369955..5370746
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AA seq
263 aa
AA seq
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MNETAARNWDSAKPAPAVLRAGAVLRALAASGGRALSAAELATAADIPRSSAMNVCVALT
QIGLVRAVSGGFALGPGLTELSQAYLDALDPVREFGTRTRAMNQIDETLQLGTLEGTDVV
YLALHGGRMPLRITSRVGSRISATCTALGKAMLAAQTDTRVRALLESRQPFVSHTENSIT
DIDTLLADLDATRQRGYAVDAEETTWGITCLAVAVPGLPDGAQPFAVSTSLLTSQAKPER
VDSLVRLIRELVTEIGAGSGSSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagacagcggcgcgcaactgggacagcgccaaacccgccccggcggtgctgcgc
gccggtgccgtcctgcgcgccctggcggcctccggcggccgggcactgagcgccgccgag
ctggccaccgccgccgacatcccccgctcctcggcgatgaacgtgtgcgtcgccctgacc
cagatcgggctggtgcgcgccgtcagcggcggcttcgcgctcggccccggcctcaccgaa
ctgtcacaggcctatctggacgccctggatccggtgcgcgagttcggaacccgcacccgc
gcgatgaaccagatcgacgagaccctacaactgggcactttggagggaaccgacgtcgtc
tatctggccctccacggtggccggatgccgctgcgcatcaccagccgggtcggatcgcgc
atctcggcgacctgcaccgcgctgggcaaggcgatgctggccgcccagaccgacacgcgg
gtccgcgcgctgctggaatcccgccagcccttcgtgtcccacaccgagaactccatcacc
gacatcgacaccctgctggccgacctggacgccacccgacagcgcggctatgccgtcgac
gccgaggagaccacctggggcatcacctgcctggcggtcgccgtccccggcctgcccgac
ggcgcccagcccttcgccgtcagcacctcgctgctgaccagccaggccaagcccgaacgc
gtcgactcgctggtgcggctgatccgcgaactggtcaccgagatcggcgccggttccggt
tcctcgcgttga
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