Stackebrandtia nassauensis: Snas_5115
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Entry
Snas_5115 CDS
T01194
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sna
Stackebrandtia nassauensis
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sna03016
]
Snas_5115
Enzymes [BR:
sna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Snas_5115
Transfer RNA biogenesis [BR:
sna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Snas_5115
Prokaryotic type
Snas_5115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADD44750
UniProt:
D3QAV4
LinkDB
All DBs
Position
complement(5432954..5433886)
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AA seq
310 aa
AA seq
DB search
MGGPGRCGGIGLAAVSQDLTGFVVVDKPPAMTSHDVVARMRRLAKTRKVGHGGTLDPMAT
GVLVLAVGRITRLLTYVTGCDKAYQATIRLGQATVTDDAEGEVTATADTAAVTEADIYAA
LEPMRGEIEQVPSAVSAIKVNGQRAYKRVRDGEDVQLAARPVTISRLDVTAIARGEDHLD
VDVSVDCSSGTYIRAIARDLGAALGVGGHLTALRRTRVGGFTLAEARTLDELSGTDNPIT
HTTVETVRRLMPIREIEAEETRKLGYGQKLTPSGQPGPYAAVGPGDVVVAVLTEDGRGAR
PEIVLAPSGG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggccgggccggtgcggtggcataggcttggcggccgtgagccaggacctgacc
ggattcgtcgtcgtcgacaagccccccgccatgacctcgcacgacgtcgtggcccggatg
cggcggctggccaagacccgcaaggtcggccacggcggcaccctcgatccgatggccacc
ggggtgctggtgctggccgtcggacggatcaccaggctgttgacctacgtgaccggctgc
gacaaggcgtaccaggccaccatccgtttggggcaggccacggtgaccgacgacgcggag
ggcgaggtgaccgcgaccgctgacaccgccgccgtcacggaggcggacatatacgcggcc
ctggaaccgatgcgcggtgagatcgagcaggtccccagcgcggtgagcgcgatcaaggtc
aacggccagcgcgcctacaagcgggtgcgcgacggtgaggacgtgcagctggcggcgcgt
ccggtgaccatctcccggctggacgtcacggcgatcgctcgcggcgaggaccacctcgat
gtggacgtgagcgtcgactgctcctcgggtacctatatccgggcgatcgcccgcgatctg
ggcgcggcgcttggcgtgggcgggcacctgaccgcgctgcgtcgcacgcgggttgggggc
ttcacgttggcggaggcccgcacgctggatgagctgtcgggcaccgacaacccgatcacg
cacaccactgtggagacggttcggcggctgatgccgatccgcgagatcgaggccgaggag
acccgcaagctgggctacggccagaagctgaccccgtcgggccagcccggcccatacgcg
gccgtcgggcccggcgacgtggtggtggcggtgctgaccgaggacggtcgcggcgcccgc
cccgagatcgtgctggctcccagcggaggctga
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